| ncRNA ID | ath-miR841b-3p |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr4:2184135-2184629 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 286 - CAAUUUCUAGUGGGUCGUAUU - 306 |
| Stem-loop(if miRNA) |
C CUAAC CA C U C AA C A CG CC G G CAGU CA U A U C -C U -GC A A CU G C G ACAAUAUCAGUAUAAA CAAAUUAG UCCU AUCUCCU CGCCAACUG AAUGC UUGGAGU AUCCUCUUCA UUUC AUC UUGUU GUGUUUU G AACU AA AACCU AGUUAGGCAUU AGGAUUGAAG CGUGUAG CAACA CAGU GCACCAA AG ACCAUGU AGA ACUCUGGUCUU AGUUG UGUGAAUACGA CCACUGGAAA UGAAA AAACAAAGAA AUUUCAU A |||| ||||||| ||||||||| ||||| ||||||| |||||||||| |||| ||| ||||| ||||||| | |||| || ||||| ||||||||||| |||||||||| ||||||| ||||| |||| ||||||| || ||||||| ||| ||||||||||| ||||| ||||||||||| |||||||||| ||||| |||||||||| ||||||| AGGA UAGAGGA GUGGUUGAU UUACG AACCUCA UAGGAGAAGU AAAG UAG AACGA CACAAAG U UUGA UU UUGGA UUAAUCCGUGA UCCUAACUUC GCACAUC GUUGU GUUA CGUGGUU UC UGGUACA UCU UGAGAUCAGAA UCAAC ACACUUAUGCU GGUGAUCUUU ACUUU UUUGUUUCUU UAAAGUA C A CGCUA AG U U A AA U A AU CA G A UACU AA C A U U CA - ACA A C AU G A A ---------------- AAAAACAU |
| Stem-loop sequence | UCCUCAUCUCCUCUAACCGCCAACUGCAAAUGCCUUGGAGUUAUCCUCUUCACUUUCAAAUCCUUGUUAGUGUUUUCGGCCAACUGAAGAACCUCAGUAGUUAGGCAUUCAAGGAUUGAAGUCGUGUAGACAACAUCAGUCGCACCAACAGUACCAUGUGCAGAAACUCUGGUCUUAAGUUGCUUGUGAAUACGAGCCACUGGAAACUGAAAGAAACAAAGAAACAAUAUCAGUAUAAAAUUUCAUCAAAUUAGACUACAAAAAAUGAAAUUUCUUUGUUUAUUUCAAUUUCUAGUGGGUCGUAUUCACAUACAACUCAAGACUAGAGUAUCUACAACAUGGUCUACUUGGUGCUAUUGUUGUUGACUACACGCCUUCAAUCCUAAAGUGCCUAAUUUCAUAGGUUAUUGAGUUACUUAGAAACACAAGCAAUGAUAAGAAAAUGAAGAGGAUUACUCCAAUGCAUUGAUAGUUGGUGAUCGCAGGAGAUAAGGA |
| 1 | PMID:20407027
"MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana"; Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC; Plant Cell. 22:1074-1089(2010). |