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BaseInfo

ncRNA ID	novel_osa_miR430
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:2373210-2373378 [+]
Reference genome	IRGSP-1.0
Source	SRR1738243;SRR1743000;SRR2099745;SRR3123630;SRR3123653;SRR1738225
Length	20
Mature sequence(if miRNA)	1 - UUUACUUGUAACGUUUGACC - 20
Stem-loop(if miRNA)	--   A               C   -            UUU       C    -----------AUAAAAAAUGAA   UUAUGCUUAAAGU   UUU CUUGUAACGUUUGAC ACU GUCUUAUUCAAA   UUUUUUG AAAU                       AAG             A   ||| ||||||||||||||| ||| ||||||||||||   ||||||| ||||                       |||   AAA GAACAUUGUAAACUG UGA CAGAAUAAGUUU   AAAAAAC UUUA                       AUG             C AA   C               C   G            --U       -    AUAAUAAAUAAAAUAAACACUGA   AAAUAAUAGAUGU
Stem-loop sequence	UUUACUUGUAACGUUUGACCACUGUCUUAUUCAAAUUUUUUUUUGCAAAUAUAAAAAAUGAAAAGUUAUGCUUAAAGUACUGUAGAUAAUAAAGUAAGUCACAAAUAAAAUAAAUAAUAAUUUCAAAAAAUUUUGAAUAAGACGAGUCGUCAAAUGUUACAAGCAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288319.1	ncRNA:20   CCAGUUUGCAAUGUUCAUUU   1   |||||||||||=|||||||| targets:1854   GGUCAAACGUUGCAAGUAAA   1873 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090021O08, full insert sequence	NA	coding protein	psRNATarget
AK289013.1	ncRNA:20   CCAGUUUGCAAUGUUCAUUU   1   *||=||||*||||||||||| targets:4002   AGUUAAACAUUACAAGUAAA   4021 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090089J03, full insert sequence	NA	coding protein	psRNATarget
XM_015761210.1	ncRNA:20   CCAGUUUGCAAUGUUCAUUU   1   |*||||||||||||*||||| targets:1338   GAUCAAACGUUACAUGUAAA   1357 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327188 (LOC4327188), transcript variant X2, mRNA	uncharacterized LOC4327188(LOC4327188)	coding protein	psRNATarget
XM_015761204.1	ncRNA:20   CCAGUUUGCAAUGUUCAUUU   1   |*||||||||||||*||||| targets:1371   GAUCAAACGUUACAUGUAAA   1390 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327188 (LOC4327188), transcript variant X1, mRNA	uncharacterized LOC4327188(LOC4327188)	coding protein	psRNATarget
XM_015761224.1	ncRNA:20   CCAGUUUGCAAUGUUCAUUU   1   |*||||||||||||*||||| targets:1416   GAUCAAACGUUACAUGUAAA   1435 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327188 (LOC4327188), transcript variant X4, mRNA	uncharacterized LOC4327188(LOC4327188)	coding protein	psRNATarget
XM_015761216.1	ncRNA:20   CCAGUUUGCAAUGUUCAUUU   1   |*||||||||||||*||||| targets:1442   GAUCAAACGUUACAUGUAAA   1461 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327188 (LOC4327188), transcript variant X3, mRNA	uncharacterized LOC4327188(LOC4327188)	coding protein	psRNATarget