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BaseInfo

ncRNA ID	novel_osa_miR428
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:35551661-35551750 [+]
Reference genome	IRGSP-1.0
Source	SRR1460508
Length	24
Mature sequence(if miRNA)	67 - GGUCUAAUUAGGCUCAAAAGAUUC - 90
Stem-loop(if miRNA)	--                  A     C     CA    UGG       AUCUUUUGAGCCUAAUUA ACCAU AUUAG  CAUG   GUUAC   |||||||||||||||||| ||||| |||||  ||||   ||||U   UAGAAAACUCGGAUUAAU UGGUA UAAUC  GUAU   CGAUG CU                  C     C     -A    UCA
Stem-loop sequence	AUCUUUUGAGCCUAAUUAAACCAUCAUUAGCACAUGUGGGUUACUGUAGCACUUAUGACUAAUCAUGGUCUAAUUAGGCUCAAAAGAUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288799.1	ncRNA:24   CUUAGAAAACUCGGAUUAAUCUGG   1   ||||||||||||||||||||||== targets:4461   GAAUCUUUUGAGCCUAAUUAGAUU   4484 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070K11, full insert sequence	NA	coding protein	psRNATarget
AK064090.1	ncRNA:24   CUUAGAAAACUCGGAUUAAUCUGG   1   |||||||||||||||||||||*|| targets:1263   GAAUCUUUUGAGCCUAAUUAGUCC   1286 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-100-D06, full insert sequence	NA	coding protein	psRNATarget
AK071825.1	ncRNA:24   CUUAGAAAACUCGGAUUAAUCUGG   1   ||||*||||||||||||||||*|| targets:1321   GAAUAUUUUGAGCCUAAUUAGUCC   1344 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023115H13, full insert sequence	NA	coding protein	psRNATarget
AK288167.1	ncRNA:24   CUUAGAAAACUCGGAUUAAUCUGG   1   |||||||||*|||||||||||*|| targets:1173   GAAUCUUUUAAGCCUAAUUAGUCC   1196 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090002K22, full insert sequence	NA	coding protein	psRNATarget
CT831729.1	ncRNA:24   CUUAGAAAACUCGGAUUAAUCUGG   1   ||=||||||*|||||||||||*|| targets:378   GAGUCUUUUAAGCCUAAUUAGUCC   401 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117A02, full insert sequence	NA	coding protein	psRNATarget