ncRNA ID | novel_osa_miR414 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:12683866-12683996 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1738243;SRR3123648;SRR3123653;SRR1738212;SRR1738235 |
Length | 24 |
Mature sequence(if miRNA) | 108 - GGCUGGGUCAAUAGCGAUCAAGGC - 131 |
Stem-loop(if miRNA) |
--   U                        AC            C     CUA  UGUCA    UU   CUU AUCGCUAUUGAUUUAGCCACGCAC  GAUAUGACGUUU UACCU   AU     UGCA  C   ||| ||||||||||||||||||||||||  |||||||||||| |||||   ||     ||||  U   GAA UAGCGAUAACUGGGUCGGUGUGUG  CUAUAUUGCAAA AUGGG   UG     AUGU  A CG   C                        CA            C     AAG  --UUC    UC |
Stem-loop sequence | CUUUAUCGCUAUUGAUUUAGCCACGCACACGAUAUGACGUUUCUACCUCUAAUUGUCAUGCAUUCUACUUGUACUUGUGAAGGGUACAAACGUUAUAUCACGUGUGUGGCUGGGUCAAUAGCGAUCAAGGC |