| ncRNA ID | novel_osa_miR410 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:38986008-38986227 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1298758;SRR4407775;SRR4407957;SRR4407959;SRR1300837 |
| Length | 24 |
| Mature sequence(if miRNA) | 197 - AUGGAUUCACCUGUGAGAUGACGU - 220 |
| Stem-loop(if miRNA) |
-- G A C UG G G ------ GGCUGG - --A ----- U AUGGAUUCACCUGUGAGAUGAC UGGUU UUUUAC UAGGA A GACGUG CAUCCUAUUA AUUUCAUGAGAU UAAUAGGAUGC AUGUC UUG UCC A |||||||||||||||||||||| ||||| |||||| ||||| | |||||| |||||||||| |||||||||||| ||||||||||| ||||| ||| ||| U UAUCUAAGUGGGCACUCUACUG ACCAA AAGGUG AUCCU U CUGUAC GUAGGAUAAU UAGAGUACUUUA AUUAUCCUACG UGCAG AAC AGG G UU A C U GU A - GGUCGG ------ G CUG CAACA U |
| Stem-loop sequence | AUGGAUUCACCUGUGAGAUGACGUGGUUAUUUUACCUAGGAUGAGGACGUGGCAUCCUAUUAAUUUCAUGAGAUGGCUGGUAAUAGGAUGCAUGUCAUUGUCCUAUGUGGAACAACCAAGUCGACGUGGCAUCCUAUUAAUUUCAUGAGAUGGCUGGUAAUAGGAUGCAUGUCAUUGUCCUAUGUGGAACAACCAAGUCAUCUCACGGGUGAAUCUAUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288887.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090079L15, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015787205.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278395 (LOC107278395), transcript variant X1, mRNA | uncharacterized LOC107278395(LOC107278395) | coding protein | psRNATarget |