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BaseInfo

ncRNA ID	novel_osa_miR369
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:941500-941679 [+]
Reference genome	IRGSP-1.0
Source	SRR1738243;SRR1738244;SRR1742989;SRR1743000;SRR1743002;SRR1743006;SRR1849765;SRR1849767;SRR1849769;SRR1849770;SRR1849772;SRR1849773;SRR1849774;SRR1849775;SRR1849776;SRR2040380;SRR2040381;SRR2040382;SRR2040383;SRR2040384;SRR2040385;SRR2040386;SRR2040387;SRR2040388;SRR2040389;SRR2040390;SRR2040391;SRR2040392;SRR2040393;SRR2040394;SRR2040395;SRR2040396;SRR2040397;SRR2040398;SRR2040399;SRR2040400;SRR2040401;SRR2040402;SRR2040403;SRR2040404;SRR2040405;SRR2040407;SRR2040408;SRR2040409;SRR2040410;SRR2857731;SRR2857732;SRR2857733;SRR3123630;SRR3123645;SRR3123646;SRR3123648;SRR3123650;SRR3123651;SRR3123653;SRR5049790;SRR5049792;SRR5351739;SRR5351740;SRR5351742;SRR1612403;SRR1612404;SRR1738210;SRR1738224;SRR1738225;SRR1738226;SRR1738227;SRR1738228;SRR1738235;SRR1738237;SRR1738239;SRR1738240;SRR1738241
Length	24
Mature sequence(if miRNA)	157 - ACUUAAAAUAGUUUGACUUUGACU - 180
Stem-loop(if miRNA)	--              C         AA    A        -   A       C    --UCA      ACAAUU      GA    A  UUC   UUAAAGUCAAACUG UUUAAGUUU  CUAA UUUGUAGA AAA AUAAUAA AUUU     ACCAAG      UUUUAU  AAAU CG   A   |||||||||||||| |||||||||  |||| |||||||| ||| ||||||| ||||     ||||||      ||||||  |||| ||   A   AGUUUCAGUUUGAU AAAUUCAAA  GAUU AAAUAUCU UUU UAUUAUU UAAA     UGGUUU      AAAGUA  UUUA GU   C UC              A         CC    C        G   A       A    UAUUA      --AAUC      -A    -  UAU
Stem-loop sequence	UUAAAGUCAAACUGCUUUAAGUUUAACUAAAUUUGUAGAAAAAAUAAUAACAUUUUCAACCAAGACAAUUUUUUAUGAAAAUACGUUCAACUAUUGAUUUAAUGAAACUAAUUUGGUAUUAUAAAUAUUAUUAUAUUUGUCUAUAAACUUAGCCAAACUUAAAAUAGUUUGACUUUGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015755259.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   =||||||||||||||=|||||||| targets:809   GGUCAAAGUCAAACUGUUUUAAGU   832 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346670 (LOC4346670), transcript variant X3, mRNA	uncharacterized LOC4346670(LOC4346670)	coding protein	psRNATarget
CT837874.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   =||*|||||||||||=|||||||| targets:148   GGUGAAAGUCAAACUGUUUUAAGU   171 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN062A18, full insert sequence	NA	coding protein	psRNATarget
XM_015779641.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   =||=*||||||||||||||||||| targets:2004   GGUUCAAGUCAAACUAUUUUAAGU   2027 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group tyrosine N-monooxygenase (LOC4335062), mRNA	tyrosine N-monooxygenase(LOC4335062)	coding protein	psRNATarget
AK288440.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   =||||||*|||||||=|||||||| targets:1210   GGUCAAAAUCAAACUGUUUUAAGU   1233 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034G20, full insert sequence	NA	coding protein	psRNATarget
CT835905.1	ncRNA:24   UC-AGUUUCAGUUUGAUAAAAUUCA   1   ||-||=||||=|||=|||||||||| targets:402   AGAUCGAAGUUAAAUUAUUUUAAGU   426 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN064J21, full insert sequence	NA	coding protein	psRNATarget
XM_015793379.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   |*||||||||||||||||*||||| targets:1800   AAUCAAAGUCAAACUAUUCUAAGU   1823 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 89B2-like (LOC107281855), mRNA	UDP-glycosyltransferase 89B2-like(LOC107281855)	coding protein	psRNATarget
XM_015783559.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   |||=||||||*|||||||*||||| targets:550   AGUUAAAGUCCAACUAUUCUAAGU   573 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277099 (LOC107277099), mRNA	uncharacterized LOC107277099(LOC107277099)	coding protein	psRNATarget
AK109722.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   |||=||||*||||||||||||*|| targets:1661   AGUUAAAGCCAAACUAUUUUAUGU   1684 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-146-B04, full insert sequence	NA	coding protein	psRNATarget
CT829512.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   **|||||||||||*|||||||||* targets:1669   UUUCAAAGUCAAAAUAUUUUAAGG   1692 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN044G15, full insert sequence	NA	coding protein	psRNATarget
XM_015760540.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   |**|||||*||||||=|||||||| targets:1046   ACACAAAGACAAACUGUUUUAAGU   1069 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group dirigent protein 19 (LOC4350075), mRNA	dirigent protein 19(LOC4350075)	coding protein	psRNATarget
AK106793.1	ncRNA:24   UCAGUUUCAGUUUGAUAAAAUUCA   1   =*|*|||||||||||||||*|||| targets:204   GCUAAAAGUCAAACUAUUUCAAGU   227 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-116-A11, full insert sequence	NA	coding protein	psRNATarget