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BaseInfo

ncRNA ID	novel_osa_miR356
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:11983539-11983721 [+]
Reference genome	IRGSP-1.0
Source	SRR1738243;SRR1738244;SRR1743006;SRR1849766;SRR1849767;SRR1849770;SRR1849772;SRR3123653;SRR1738211
Length	24
Mature sequence(if miRNA)	160 - AACGUUGAACAUGAAUAGUGCAAA - 183
Stem-loop(if miRNA)	--                                             --A       --AAAAAUUA  AACAUUUAGUCACACAUAAAGUAC   UGCACUAUUCAUGUUCAACGUUUGACCGUCCGUCUUAUUUGAAAA   UUUAUGA          AA                        U   |||||||||||||||||||||||||||||||||||||||||||||   |||||||          ||                        A   ACGUGAUAAGUACAAGUUGCAAACUGGCAGGCAGAAUAAACUUUU   AAAUACU          AU                        U AA                                             AAA       AAUAAUAAAA  AACGAUAAUCUACUAUUUUGUACU
Stem-loop sequence	UGCACUAUUCAUGUUCAACGUUUGACCGUCCGUCUUAUUUGAAAAAUUUAUGAAAAAAUUAAAAACAUUUAGUCACACAUAAAGUACUAUUCAUGUUUUAUCAUCUAAUAGCAAUAAAAAUAAUAAUCAUAAAAAAUUUUCAAAUAAGACGGACGGUCAAACGUUGAACAUGAAUAGUGCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT837669.1	ncRNA:24   AAA-CGUGAUAAGUACAAGUUGCAA   1   |||-||||||||||||||||||||| targets:197   UUUAGCACUAUUCAUGUUCAACGUU   221 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA010G19, full insert sequence	NA	coding protein	psRNATarget
AK288230.1	ncRNA:24   AAACGUGAUAAGUACAAGUUGCAA   1   |||||||||||||*|||||||||| targets:5270   UUUGCACUAUUCACGUUCAACGUU   5293 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012M14, full insert sequence	NA	coding protein	psRNATarget
AK069810.1	ncRNA:24   AAACGUGAUAAGUACAAGUUGCAA   1   ||||||||=||||||||||||*|| targets:2662   UUUGCACUGUUCAUGUUCAACUUU   2685 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023027G23, full insert sequence	NA	coding protein	psRNATarget
XM_015768707.1	ncRNA:24   AAA-CGUGAUAAGUACAAGUUGCAA   1   |||-|||||=|||||||*||||||| targets:1219   UUUAGCACUGUUCAUGUCCAACGUU   1243 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X3, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget
XM_015768705.1	ncRNA:24   AAA-CGUGAUAAGUACAAGUUGCAA   1   |||-|||||=|||||||*||||||| targets:1219   UUUAGCACUGUUCAUGUCCAACGUU   1243 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X1, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget
XM_015768708.1	ncRNA:24   AAA-CGUGAUAAGUACAAGUUGCAA   1   |||-|||||=|||||||*||||||| targets:1219   UUUAGCACUGUUCAUGUCCAACGUU   1243 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X4, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget
XM_015768706.1	ncRNA:24   AAA-CGUGAUAAGUACAAGUUGCAA   1   |||-|||||=|||||||*||||||| targets:1219   UUUAGCACUGUUCAUGUCCAACGUU   1243 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X2, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget