ncRNA ID | novel_osa_miR332 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:8749074-8749162 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1738243;SRR3123653 |
Length | 22 |
Mature sequence(if miRNA) | 68 - UUUCGCAUGCGGCUGGCUUAAC - 89 |
Stem-loop(if miRNA) |
--           G   -      UCUU     CA     -   GC   UAAGCCAGCCG AUG GAAAGA    UUUCC  UGCGG CCG  U   ||||||||||| ||| ||||||    |||||  ||||| |||   AUUCGGUCGGC UAC CUUUUU    AAAGG  ACGCC GGU  U CA           G   G      CUAU     -C     C   AU |
Stem-loop sequence | UAAGCCAGCCGGAUGGAAAGAUCUUUUUCCCAUGCGGCCGGCUUUAUGGCCCGCACGGAAAUAUCUUUUUCGCAUGCGGCUGGCUUAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK106655.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:002-113-G04, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK109584.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:002-137-A10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288261.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090015P07, full insert sequence | NA | coding protein | psRNATarget |