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BaseInfo

ncRNA ID novel_osa_miR331
Species Oryza sativa
Class miRNA
Genome position Chr3:1893098-1893199 [-]
Reference genome IRGSP-1.0
Source SRR1738243;SRR3123653
Length 20
Mature sequence(if miRNA) 1 - ACUUUGUAAGGACUAUGUAC - 20
Stem-loop(if miRNA) ACC         ---    C CC    -----------       UUCU -    -  
   CAUGGUCCU   GAAG U  CCAG           UUAUAUU    C GUGG CCU
   |||||||||   |||| |  ||||           |||||||    | |||| ||U
   GUAUCAGGA   UUUC A  GGUC           AGUGUAA    G CGCC GGU
CAU         AUG    - UU    UUUUUAUUUGU       UAAU U    A  
Stem-loop sequence ACCCAUGGUCCUGAAGCUCCCCAGUUAUAUUUUCUCGUGGCCUUUGGACCGCUGUAAUAAUGUGAUGUUUAUUUUUCUGGUUACUUUGUAAGGACUAUGUAC