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BaseInfo

ncRNA ID novel_osa_miR299
Species Oryza sativa
Class miRNA
Genome position Chr2:30344745-30344900 [-]
Reference genome IRGSP-1.0
Source SRR1738243;SRR3123653
Length 24
Mature sequence(if miRNA) 1 - AAGACGGAGAGCCAAAUAUUGGAC - 24
Stem-loop(if miRNA) --    CG    A CG               UU  UUUA    -----------UUGGUA     - UUGUAAUUAGAUGAUAAA
  CCAA  UUUG C  UUUGUUUUAUUUGAA  UU    AUGA                 GUUUU A                  A
  ||||  |||| |  |||||||||||||||  ||    ||||                 ||||| |
  GGUU  AAAC G  AGGCAGAAUAAAUUU  AA    UACU                 UUCAU G                  C
CA    AU    C AG               UU  --CA    UUUUUAAUUUUUUUUUA     U UGUAUUUCAUGAAAAAUA
Stem-loop sequence CCAACGUUUGACCGUUUGUUUUAUUUGAAUUUUUUUAAUGAUUGGUAGUUUUAUUGUAAUUAGAUGAUAAAACAUAAAAAGUACUUUAUGUGUUACUUAUUUUUUUUUAAUUUUUUCAUACAAUUUUUAAAUAAGACGGAGAGCCAAAUAUUGGAC