ncRNA ID | novel_osa_miR299 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:30344745-30344900 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738243;SRR3123653 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGACGGAGAGCCAAAUAUUGGAC - 24 |
Stem-loop(if miRNA) |
--    CG    A CG               UU  UUUA    -----------UUGGUA     - UUGUAAUUAGAUGAUAAA   CCAA  UUUG C  UUUGUUUUAUUUGAA  UU    AUGA                 GUUUU A                  A   ||||  |||| |  |||||||||||||||  ||    ||||                 ||||| |   GGUU  AAAC G  AGGCAGAAUAAAUUU  AA    UACU                 UUCAU G                  C CA    AU    C AG               UU  --CA    UUUUUAAUUUUUUUUUA     U UGUAUUUCAUGAAAAAUA |
Stem-loop sequence | CCAACGUUUGACCGUUUGUUUUAUUUGAAUUUUUUUAAUGAUUGGUAGUUUUAUUGUAAUUAGAUGAUAAAACAUAAAAAGUACUUUAUGUGUUACUUAUUUUUUUUUAAUUUUUUCAUACAAUUUUUAAAUAAGACGGAGAGCCAAAUAUUGGAC |