ncRNA ID | novel_osa_miR282 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:19738423-19738555 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738243;SRR3123653 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AAUCACUUUGUCGGAUGAACAAAUG - 25 |
Stem-loop(if miRNA) |
--   C              C   -A            U      U  C        AC       U   UUU UUCAUCCGACAAAG GAU  GUAACAUUGUUC UAAAAU UA AUAUCUUU  UAUAGUU A   ||| |||||||||||||| |||  |||||||||||| |||||| || ||||||||  |||||||   AAA AAGUAGGCUGUUUC CUA  CAUUGUAACAAG GUUUUA AU UAUAGAGA  AUGUUAA C GU   C              A   AA            U      C  C        AU       A |
Stem-loop sequence | UUUCUUCAUCCGACAAAGCGAUAGUAACAUUGUUCUUAAAAUUUACAUAUCUUUACUAUAGUUUACAAAUUGUAUAAGAGAUAUCUACAUUUUGUGAACAAUGUUACAAAUCACUUUGUCGGAUGAACAAAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289001.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090088H22, full insert sequence | NA | coding protein | psRNATarget |