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BaseInfo

ncRNA ID novel_osa_miR282
Species Oryza sativa
Class miRNA
Genome position Chr1:19738423-19738555 [-]
Reference genome IRGSP-1.0
Source SRR1738243;SRR3123653
Length 25
Mature sequence(if miRNA) 1 - AAUCACUUUGUCGGAUGAACAAAUG - 25
Stem-loop(if miRNA) --   C              C   -A            U      U  C        AC       U
  UUU UUCAUCCGACAAAG GAU  GUAACAUUGUUC UAAAAU UA AUAUCUUU  UAUAGUU A
  ||| |||||||||||||| |||  |||||||||||| |||||| || ||||||||  |||||||
  AAA AAGUAGGCUGUUUC CUA  CAUUGUAACAAG GUUUUA AU UAUAGAGA  AUGUUAA C
GU   C              A   AA            U      C  C        AU       A
Stem-loop sequence UUUCUUCAUCCGACAAAGCGAUAGUAACAUUGUUCUUAAAAUUUACAUAUCUUUACUAUAGUUUACAAAUUGUAUAAGAGAUAUCUACAUUUUGUGAACAAUGUUACAAAUCACUUUGUCGGAUGAACAAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289001.1
ncRNA:25   GUAAACAAGUAGGCUGUUUCACUAA   1
  |||||*|||||*|||||||||||||
targets:8   CAUUUCUUCAUACGACAAAGUGAUU   32

1.0 Oryza sativa Japonica Group cDNA, clone: J090088H22, full insert sequence NA coding protein psRNATarget