ncRNA ID | novel_osa_miR281 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:7064088-7064169 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1738243;SRR3123650;SRR3123653;SRR1738239 |
Length | 21 |
Mature sequence(if miRNA) | 62 - UUAUUGUCUUAAGGGAUGUCC - 82 |
Stem-loop(if miRNA) |
--        -                 CG     A   GA   ACAUCCCU AAGACAGUAAAAGAGUU  CCCGU GUA  U   |||||||| |||||||||||||||||  ||||| |||  C   UGUAGGGA UUCUGUUAUUUUCUCAA  GGGCA CAU  U CC        A                 AG     A   AC |
Stem-loop sequence | ACAUCCCUAAGACAGUAAAAGAGUUCGCCCGUAGUAGAUCUCAUACAACGGGGAAACUCUUUUAUUGUCUUAAGGGAUGUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK240748.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J043039I02, full insert sequence | NA | coding protein | psRNATarget |