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BaseInfo

ncRNA ID novel_osa_miR281
Species Oryza sativa
Class miRNA
Genome position Chr1:7064088-7064169 [+]
Reference genome IRGSP-1.0
Source SRR1738243;SRR3123650;SRR3123653;SRR1738239
Length 21
Mature sequence(if miRNA) 62 - UUAUUGUCUUAAGGGAUGUCC - 82
Stem-loop(if miRNA) --        -                 CG     A   GA
  ACAUCCCU AAGACAGUAAAAGAGUU  CCCGU GUA  U
  |||||||| |||||||||||||||||  ||||| |||  C
  UGUAGGGA UUCUGUUAUUUUCUCAA  GGGCA CAU  U
CC        A                 AG     A   AC
Stem-loop sequence ACAUCCCUAAGACAGUAAAAGAGUUCGCCCGUAGUAGAUCUCAUACAACGGGGAAACUCUUUUAUUGUCUUAAGGGAUGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK240748.1
ncRNA:21   CCUGUAGGGAAUUCUGUUAUU   1
  *|==|||||||||||||||||
targets:1076   UGGUAUCCCUUAAGACAAUAA   1096

2.0 Oryza sativa Japonica Group cDNA, clone: J043039I02, full insert sequence NA coding protein psRNATarget