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BaseInfo

ncRNA ID	novel_osa_miR267
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:29963439-29963639 [+]
Reference genome	IRGSP-1.0
Source	SRR1738243;SRR1738244;SRR1742988;SRR1742989;SRR1742990;SRR1742994;SRR1742995;SRR1743000;SRR1743002;SRR1743006;SRR1849765;SRR1849766;SRR1849767;SRR1849768;SRR1849770;SRR1849771;SRR1849772;SRR1849773;SRR1849774;SRR1849775;SRR1849781;SRR2040380;SRR2040381;SRR2040384;SRR2040385;SRR2040386;SRR2040387;SRR2040388;SRR2040389;SRR2040390;SRR2040391;SRR2040392;SRR2040393;SRR2040398;SRR2040400;SRR2040401;SRR2040403;SRR2040404;SRR2040405;SRR2040406;SRR2040408;SRR2040410;SRR2040411;SRR2857732;SRR2857734;SRR2857735;SRR2857736;SRR3085192;SRR3123630;SRR3123645;SRR3123650;SRR3123653;SRR5351738;SRR5351739;SRR5351740;SRR1609317;SRR1738211;SRR1738216;SRR1738222;SRR1738225;SRR1738226;SRR1738239
Length	24
Mature sequence(if miRNA)	1 - AACGUAGAUUACUGACAAAACUCA - 24
Stem-loop(if miRNA)	--                    C  -               AU                  C   CG G              A   U  UACAG    -  U   AACGUAGAUUACUGACAAAA UC AUUCUAUAACCUCUA  CUAUUUUGCGAGACGAAU UAA  A GUAUAUUAAUCUAU AUU GC     UGAU GC A   |||||||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||  | |||||||||||||| ||| ||     |||| ||   UUGCAUCUAAUGGCUGUUUU AG UAAGGUAUUGGGGAU  GAUAAAACGCUCUGCUUA AUU  U CAUAUGAUUAGGUA UAA CG     ACUA UG C AU                    -  C               CC                  A   AU A              C   U  --UUA    A  A
Stem-loop sequence	AACGUAGAUUACUGACAAAACUCAUUCUAUAACCUCUAAUCUAUUUUGCGAGACGAAUCUAACGAGGUAUAUUAAUCUAUAAUUUGCUACAGUGAUGCUACAGUAAUCAAUUGCUAAUCAUGGAUUAGUAUACAUUAUUAAAUUCGUCUCGCAAAAUAGCCUAGGGGUUAUGGAAUCGAUUUUGUCGGUAAUCUACGUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015762321.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |||*||||*||||||||||||||| targets:1109   UGAAUUUUAUCAGUAAUCUACGUU   1132 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group transcription initiation factor TFIID subunit 13 (LOC9268703), mRNA	transcription initiation factor TFIID subunit 13(LOC9268703)	coding protein	psRNATarget
AK240978.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |*||||||||*|||||||||=||| targets:540   UUAGUUUUGUAAGUAAUCUAUGUU   563 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065048J02, full insert sequence	NA	coding protein	psRNATarget
XM_015781418.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |*=|||||*|||||||||||=||| targets:1305   UAGGUUUUAUCAGUAAUCUAUGUU   1328 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4335446), mRNA	serine/arginine repetitive matrix protein 1(LOC4335446)	coding protein	psRNATarget
AK107263.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |*=|||||*|||||||||||=||| targets:1216   UAGGUUUUAUCAGUAAUCUAUGUU   1239 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-125-H03, full insert sequence	NA	coding protein	psRNATarget
XM_015766387.1	ncRNA:24   ACUCAAAACAGUCAUUAGAUGCAA   1   |**|||||||=|*||||||||||| targets:21   UUUGUUUUGUUAUUAAUCUACGUU   44 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4325753 (LOC4325753), mRNA	uncharacterized LOC4325753(LOC4325753)	coding protein	psRNATarget