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BaseInfo

ncRNA ID	novel_osa_miR241
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:18804926-18805006 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1743002;SRR1849771;SRR2040380;SRR2040382;SRR2040383;SRR2040385;SRR2040386;SRR2040388;SRR2040389;SRR2040390;SRR2040391;SRR2040392;SRR2040394;SRR2040395;SRR2040396;SRR2040397;SRR2040399;SRR2040402;SRR2040403;SRR2040406;SRR2040407;SRR2040408;SRR2040410;SRR2040411;SRR3123651;SRR3123652;SRR5049784;SRR1609312;SRR1612403;SRR1738240
Length	24
Mature sequence(if miRNA)	58 - AACGAUCGGAAAUGAUUUGGUACC - 81
Stem-loop(if miRNA)	--                               AAUACCC   UACUAAAUUAUUUCUGAUCGUUGGAUCUAAC       A   |||||||||||||||||||||||||||||||       U   AUGGUUUAGUAAAGGCUAGCAAUCUAGAUUG       C CC                               AUCCGUU
Stem-loop sequence	UACUAAAUUAUUUCUGAUCGUUGGAUCUAACAAUACCCAUCUUGCCUAGUUAGAUCUAACGAUCGGAAAUGAUUUGGUACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015786123.1	ncRNA:24   CCAUGGUUUAGUAAAGGCUAGCAA   1   ||||||||||==|||||||||||| targets:657   GGUACCAAAUUGUUUCCGAUCGUU   680 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
AK288876.1	ncRNA:24   CCAUGGUUUAGUAAAGGCUAGCAA   1   |||||=|||||||||=|||||||| targets:237   GGUACUAAAUCAUUUUCGAUCGUU   260 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090078P15, full insert sequence	NA	coding protein	psRNATarget
AK287529.1	ncRNA:24   CCAUGGUUUAGUAAAGGCUAGCAA   1   ||||||||||==|||||||||||| targets:168   GGUACCAAAUUGUUUCCGAUCGUU   191 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:24   CCAUGGUUUAGUAAAGGCUAGCAA   1   ||||||||||==|||||||||||| targets:168   GGUACCAAAUUGUUUCCGAUCGUU   191 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
JB164791.1	ncRNA:22   AUGGUUUAGUAAAGGCUAGCAA   1   |||=|||||||||||||||||| targets:1   UACUAAAUCAUUUCCGAUCGUU   22 Target Full Sequence	1.0	Sequence 2455 from Patent EP2559767	NA	coding protein	psRNATarget
HI404330.1	ncRNA:22   AUGGUUUAGUAAAGGCUAGCAA   1   |||=|||||||||||||||||| targets:1   UACUAAAUCAUUUCCGAUCGUU   22 Target Full Sequence	1.0	Sequence 2455 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236460.1	ncRNA:22   AUGGUUUAGUAAAGGCUAGCAA   1   |||=|||||||||||||||||| targets:1   UACUAAAUCAUUUCCGAUCGUU   22 Target Full Sequence	1.0	Sequence 2455 from Patent EP2985353	NA	coding protein	psRNATarget
AK108234.1	ncRNA:24   CCAUGGUUUAGUAAAGGCUAGCAA   1   |*|||=||||||||||=||||||| targets:447   GAUACUAAAUCAUUUCUGAUCGUU   470 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-140-G06, full insert sequence	NA	coding protein	psRNATarget
XM_015787276.1	ncRNA:24   CCAUGGUUUAGUAAAGGCUAGCAA   1   |**|||||||=|||||=||||||| targets:1425   GACACCAAAUUAUUUCUGAUCGUU   1448 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein ASPARTIC PROTEASE IN GUARD CELL 2 (LOC4339950), mRNA	protein ASPARTIC PROTEASE IN GUARD CELL 2(LOC4339950)	coding protein	psRNATarget