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BaseInfo

ncRNA ID	novel_osa_miR240
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:4626757-4626832 [-]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1738243;SRR1738244;SRR1742988;SRR1849775;SRR2040391;SRR2098823;SRR2857728;SRR3123648;SRR3123651;SRR3123652;SRR3123653;SRR1738235;SRR1738240
Length	21
Mature sequence(if miRNA)	56 - UUUUUUGUUGGAUGUGACAUC - 76
Stem-loop(if miRNA)	---     U                           UC    UUUUU GUUGGAUGUGACAUCCUAGUACUAUGA  C    ||||| |||||||||||||||||||||||||||  A    AAAAA CAACCUACACUGUAGGAUCAUGAUACU  G CCA     C                           UA
Stem-loop sequence	UUUUUUGUUGGAUGUGACAUCCUAGUACUAUGAUCCAGAUUCAUAGUACUAGGAUGUCACAUCCAACCAAAAAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289139.1	ncRNA:21   CUACAGUGUAGGUUGUUUUUU   1   *|||||||||=|||||||||* targets:1376   UAUGUCACAUUCAACAAAAAU   1396 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090099E06, full insert sequence	NA	coding protein	psRNATarget
HI404126.1	ncRNA:21   CUACAGUGUAGGUUGUUUUUU   1   ||||||*||||||||*||||| targets:73   GAUGUCUCAUCCAACUAAAAA   93 Target Full Sequence	2.5	Sequence 2251 from Patent EP2074227	NA	coding protein	psRNATarget
JB164587.1	ncRNA:21   CUACAGUGUAGGUUGUUUUUU   1   ||||||*||||||||*||||| targets:73   GAUGUCUCAUCCAACUAAAAA   93 Target Full Sequence	2.5	Sequence 2251 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236256.1	ncRNA:21   CUACAGUGUAGGUUGUUUUUU   1   ||||||*||||||||*||||| targets:73   GAUGUCUCAUCCAACUAAAAA   93 Target Full Sequence	2.5	Sequence 2251 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015760853.1	ncRNA:21   CUACAGUGUAGGUUGUUUUUU   1   **|||=|||||||||||||*| targets:654   UCUGUUACAUCCAACAAAACA   674 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group U-box domain-containing protein 51-like (LOC107278050), mRNA	U-box domain-containing protein 51-like(LOC107278050)	coding protein	psRNATarget
AK288631.1	ncRNA:21   CUACAGUGUAGGUUGUUUUUU   1   *=|||||||||||||*||||* targets:1339   UGUGUCACAUCCAACCAAAAU   1359 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090055C12, full insert sequence	NA	coding protein	psRNATarget