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BaseInfo

ncRNA ID	novel_osa_miR227
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:13211444-13211493 [-]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1555746;SRR2040387;SRR2040400;SRR2040401;SRR1555749;SRR2097778;SRR2097779;SRR2098557;SRR2098560;SRR1555751;SRR2099567;SRR2099745;SRR2458631;SRR1556011;SRR2857733;SRR2857734;SRR2857736;SRR1556014;SRR3123651;SRR3123652;SRR3234042;SRR4407777;SRR4407957;SRR1556016;SRR5049781;SRR5049784;SRR5049788;SRR5049791;SRR1556018;SRR1298766;SRR1654490;SRR1654491;SRR1738240
Length	22
Mature sequence(if miRNA)	29 - AACGAGGAGGCCGGGACCACCG - 50
Stem-loop(if miRNA)	--AA             AC     G     CGAGGAGGCCGGG  CACCG A     |||||||||||||  |||||     GCUCCUCCGGCCU  GUGGC U GGCC             CA     C
Stem-loop sequence	AACGAGGAGGCCGGGACCACCGGAUCCGGUGACUCCGGCCUCCUCGCCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK287884.1	ncRNA:22   GCCACCAGGGCCGGAGGAGCAA   1   ||**|||||||||||||||||| targets:2474   CGACGGUCCCGGCCUCCUCGUU   2495 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J065207L05, full insert sequence	NA	coding protein	psRNATarget
XM_015781899.1	ncRNA:22   GCCACCAGGGCCGGAGGAGCAA   1   |||||**||||||||||||||* targets:196   CGGUGACCCCGGCCUCCUCGUC   217 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4337737 (LOC4337737), transcript variant X2, mRNA	uncharacterized LOC4337737(LOC4337737)	coding protein	psRNATarget
XM_015781900.1	ncRNA:22   GCCACCAGGGCCGGAGGAGCAA   1   |||||**||||||||||||||* targets:196   CGGUGACCCCGGCCUCCUCGUC   217 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4337737 (LOC4337737), transcript variant X3, mRNA	uncharacterized LOC4337737(LOC4337737)	coding protein	psRNATarget
AK101387.1	ncRNA:22   GCCACCAGGGCCGGAGGAGCAA   1   |||||**||||||||||||||* targets:147   CGGUGACCCCGGCCUCCUCGUC   168 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J033036G05, full insert sequence	NA	coding protein	psRNATarget