ncRNA ID | novel_osa_miR225 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:12313591-12313644 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1298758;SRR2098822;SRR2098823;SRR2099428;SRR2099436;SRR1300837 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AAACUAGAUUGUUAUAAUC - 19 |
Stem-loop(if miRNA) |
--    U         A    UG   CA   UUAU AUAAUCUAG UUAU  AGU  G   |||| ||||||||| ||||  |||   AAUA UGUUAGAUC AAUG  UCA  A CU    U         A    --   UU |
Stem-loop sequence | UUAUUAUAAUCUAGAUUAUUGAGUCAGAUUACUGUAAACUAGAUUGUUAUAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015766281.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group putative D-cysteine desulfhydrase 2, mitochondrial (LOC9270375), transcript variant X2, mRNA | putative D-cysteine desulfhydrase 2, mitochondrial(LOC9270375) | coding protein | psRNATarget | |||||||||
AK100384.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023085H13, full insert sequence | NA | coding protein | psRNATarget |