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BaseInfo

ncRNA ID novel_osa_miR225
Species Oryza sativa
Class miRNA
Genome position Chr3:12313591-12313644 [-]
Reference genome IRGSP-1.0
Source SRR1298758;SRR2098822;SRR2098823;SRR2099428;SRR2099436;SRR1300837
Length 19
Mature sequence(if miRNA) 1 - AAACUAGAUUGUUAUAAUC - 19
Stem-loop(if miRNA) --    U         A    UG   CA
  UUAU AUAAUCUAG UUAU  AGU  G
  |||| ||||||||| ||||  |||
  AAUA UGUUAGAUC AAUG  UCA  A
CU    U         A    --   UU
Stem-loop sequence UUAUUAUAAUCUAGAUUAUUGAGUCAGAUUACUGUAAACUAGAUUGUUAUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015766281.1
ncRNA:19   CUAAUAUUGUUAGAUCAAA   1
  ||||||||||||||||*||
targets:1526   GAUUAUAACAAUCUAGAUU   1544

1.5 PREDICTED: Oryza sativa Japonica Group putative D-cysteine desulfhydrase 2, mitochondrial (LOC9270375), transcript variant X2, mRNA putative D-cysteine desulfhydrase 2, mitochondrial(LOC9270375) coding protein psRNATarget
AK100384.1
ncRNA:19   CUAAUAUUGUUAGAUCAAA   1
  *|||||||||||||||*||
targets:1203   UAUUAUAACAAUCUAGCUU   1221

2.5 Oryza sativa Japonica Group cDNA clone:J023085H13, full insert sequence NA coding protein psRNATarget