ncRNA ID | novel_osa_miR222 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:15955111-15955277 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738242;SRR3123652 |
Length | 24 |
Mature sequence(if miRNA) | 144 - UUCUUUCAACGUUUGAUCAUUCGU - 167 |
Stem-loop(if miRNA) |
---UUCUUU                           UUUUU      U    AUAAAAAACAAAAAA     -  UAAAA    G  G          CAACGUUUGAUCAUUCGUCUUAUUUAA     UUUUUG AAAU               UUGUG CU     UACU UA A          |||||||||||||||||||||||||||     |||||| ||||               ||||| ||     |||| || U          GUUGCAAACUAGUGAGUAGAAUAAGUU     AAAAAC UUUA               AACAC GA     AUGA AU A AAAACAAAC                           --UUU      -    AUAAUAAAUAAAAUA     U  -----    A  A |
Stem-loop sequence | UUCUUUCAACGUUUGAUCAUUCGUCUUAUUUAAUUUUUUUUUUGUAAAUAUAAAAAACAAAAAAUUGUGCUUAAAAUACUGUAGAUAAUAAAGUAAGUCACAAAUAAAAUAAAUAAUAAUUUCAAAAAUUUUUGAAUAAGAUGAGUGAUCAAACGUUGCAAACAAAA |