ncRNA ID | novel_osa_miR220 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:16555520-16555599 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1738242;SRR1738243;SRR1742992;SRR1742993;SRR1849765;SRR1849767;SRR1849769;SRR1849770;SRR1849773;SRR2040381;SRR2040384;SRR2040387;SRR2040397;SRR2040400;SRR2040401;SRR1555749;SRR1298758;SRR2097778;SRR2097779;SRR2098557;SRR2098560;SRR1555751;SRR2099567;SRR2099746;SRR2458631;SRR1556011;SRR2857730;SRR2857732;SRR2857734;SRR2857736;SRR3123646;SRR3123652;SRR3123653;SRR3234042;SRR3234045;SRR4407779;SRR4407956;SRR4407957;SRR4407958;SRR1556016;SRR4407959;SRR4407962;SRR5049791;SRR1556018;SRR1298766;SRR1609313;SRR1654490;SRR1654491;SRR1300837;SRR1738210;SRR1738212;SRR1738224;SRR1738228;SRR1738241 |
Length | 23 |
Mature sequence(if miRNA) | 1 - ACUUAAUCUGGACACUAUAAAAG - 23 |
Stem-loop(if miRNA) |
--                     AGAAAAU  U      G   ACUUAAUCUGGACACUAUAAA       UG GCAUGU A   |||||||||||||||||||||       || ||||||   UGAGUUAGACUUGUGAUGUUU       AC CGUAUA A UU                     AAAUAUU  C      A |
Stem-loop sequence | ACUUAAUCUGGACACUAUAAAAGAAAAUUGUGCAUGUGAAAAUAUGCCCAUUAUAAAUUUGUAGUGUUCAGAUUGAGUUU |