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BaseInfo

ncRNA ID	novel_osa_miR213
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:3299157-3299246 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1738243;SRR1743002;SRR1849770;SRR2040381;SRR2040384;SRR2040387;SRR2040393;SRR2040395;SRR2040397;SRR2040400;SRR2040411;SRR2099567;SRR1556011;SRR3123646;SRR3123651;SRR3123652;SRR3123653;SRR3234040;SRR3234042;SRR3234045;SRR5049784;SRR1609313;SRR1654490;SRR1654491;SRR1738228;SRR1738240
Length	20
Mature sequence(if miRNA)	71 - UGAAGUGUUUGGGGGAACUC - 90
Stem-loop(if miRNA)	--          C         -   ---   U    -  -    A AA   GUUUCCUCAA ACACUUCAC AUC   UGC AGGC CC UAUU C  U   |||||||||| ||||||||| |||   ||| |||| || |||| |   CAAGGGGGUU UGUGAAGUG UGG   ACG UCUG GG GUAA G  U CU          -         A   UUA   -    A  U    C CG
Stem-loop sequence	GUUUCCUCAACACACUUCACAUCUGCUAGGCCCUAUUACAAUUGCGCAAUGUGGAGUCUGCAAUUGGUAGUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK111395.1	ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1   |||||||||||||||||||| targets:318   GAGUUCCCCCAAACACUUCA   337 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-182-D04, full insert sequence	NA	coding protein	psRNATarget
XM_015775300.1	ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1   |||||||||||||||||||| targets:322   GAGUUCCCCCAAACACUUCA   341 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331934), mRNA	low affinity sulfate transporter 3(LOC4331934)	coding protein	psRNATarget
AK067353.1	ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1   ||||||*||||||||||||| targets:112   GAGUUCACCCAAACACUUCA   131 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013100L12, full insert sequence	NA	coding protein	psRNATarget
XM_015775294.1	ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1   ||||||*||||||||||||| targets:529   GAGUUCACCCAAACACUUCA   548 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331932), transcript variant X3, mRNA	low affinity sulfate transporter 3(LOC4331932)	coding protein	psRNATarget
XM_015775293.1	ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1   ||||||*||||||||||||| targets:2647   GAGUUCACCCAAACACUUCA   2666 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331932), transcript variant X2, mRNA	low affinity sulfate transporter 3(LOC4331932)	coding protein	psRNATarget
XM_015775292.1	ncRNA:20   CUCAAGGGGGUUUGUGAAGU   1   ||||||*||||||||||||| targets:2776   GAGUUCACCCAAACACUUCA   2795 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group low affinity sulfate transporter 3 (LOC4331932), transcript variant X1, mRNA	low affinity sulfate transporter 3(LOC4331932)	coding protein	psRNATarget