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BaseInfo

ncRNA ID novel_osa_miR210
Species Oryza sativa
Class miRNA
Genome position Chr8:26181394-26181455 [+]
Reference genome IRGSP-1.0
Source SRR1738242;SRR1738243;SRR1743002;SRR1849769;SRR2040384;SRR2099746;SRR2857728;SRR2857729;SRR3085192;SRR3123646;SRR3123650;SRR3123652;SRR3123653;SRR1738228;SRR1738239
Length 24
Mature sequence(if miRNA) 1 - UACAUGUAUAAAAUUCUGAGGAUG - 24
Stem-loop(if miRNA) --                            A
  UACAUGUAUAAAAUUCUGAGGAUGUUAU U
  ||||||||||||||||||||||||||||
  AUGUACAUAUUUUAGGACUCCUACAGUA A
AA                            U
Stem-loop sequence UACAUGUAUAAAAUUCUGAGGAUGUUAUAUAUAUGACAUCCUCAGGAUUUUAUACAUGUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI404241.1
ncRNA:24   GUAGGAGUCUUAAAAUAUGUACAU   1
  |||||||||=||||||||||||||
targets:49   CAUCCUCAGGAUUUUAUACAUGUA   72

1.0 Sequence 2366 from Patent EP2074227 NA coding protein psRNATarget
LQ236371.1
ncRNA:24   GUAGGAGUCUUAAAAUAUGUACAU   1
  |||||||||=||||||||||||||
targets:49   CAUCCUCAGGAUUUUAUACAUGUA   72

1.0 Sequence 2366 from Patent EP2985353 NA coding protein psRNATarget
JB164702.1
ncRNA:24   GUAGGAGUCUUAAAAUAUGUACAU   1
  |||||||||=||||||||||||||
targets:49   CAUCCUCAGGAUUUUAUACAUGUA   72

1.0 Sequence 2366 from Patent EP2559767 NA coding protein psRNATarget