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BaseInfo

ncRNA ID	novel_osa_miR209
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:22713084-22713245 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR3123652
Length	22
Mature sequence(if miRNA)	1 - UAUCCGUGCUCAACGUUUGACC - 22
Stem-loop(if miRNA)	---UA  -   GC             AUC   C               ----------------  AAAUAUUUAGUCACACAUAAAGUAC      UC CGU  UCAACGUUUGACC   CGU UUAUUUGAAAAAUUU                UA                         U      || |||  |||||||||||||   ||| |||||||||||||||                ||      AG GCA  AGUUGCAAACUGG   GCA AAUAAACUUUUUAAA                AU                         A UGAUA  U   --             CAA   A               AAUACUAAUCAUAAAA  AACGAUAAUCUACUAUUUUGUACUU
Stem-loop sequence	UAUCCGUGCUCAACGUUUGACCAUCCGUCUUAUUUGAAAAAUUUUAAAAUAUUUAGUCACACAUAAAGUACUAUUCAUGUUUUAUCAUCUAAUAGCAAUAAAAAUACUAAUCAUAAAAAUUUUUCAAAUAAAACGAACGGUCAAACGUUGAACGUGAAUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015782022.1	ncRNA:22   CCAGUUUGCAACUCGUGCCUAU   1   ||||||||||||=||||||||| targets:1547   GGUCAAACGUUGGGCACGGAUA   1568 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group zinc transporter 9 (LOC4339080), transcript variant X1, mRNA	zinc transporter 9(LOC4339080)	coding protein	psRNATarget
XM_015782023.1	ncRNA:22   CCAGUUUGCAACUCGUGCCUAU   1   ||||||||||||=||||||||| targets:2589   GGUCAAACGUUGGGCACGGAUA   2610 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group zinc transporter 9 (LOC4339080), transcript variant X2, mRNA	zinc transporter 9(LOC4339080)	coding protein	psRNATarget
AK288670.1	ncRNA:22   CCAGUUUGCAACUCGUGCCUAU   1   ||||||||||||=||||||||| targets:1076   GGUCAAACGUUGGGCACGGAUA   1097 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090058O04, full insert sequence	NA	coding protein	psRNATarget