ncRNA ID | novel_osa_miR203 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:5139107-5139220 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1460508 |
Length | 25 |
Mature sequence(if miRNA) | 1 - GGCUAUUUUGUGAGACGAAUCUAAC - 25 |
Stem-loop(if miRNA) |
-  -                      C  GU                 ---U    CA  GG CUAUUUUGUGAGACGAAUCUAA GA  UAUAUUAAUCCAUAAUU    GCUA  G  || |||||||||||||||||||||| ||  |||||||||||||||||    ||||  U  UC GAUAAAACGCUCUGCUUAGAUU CU  AUAUAAUUAGGUAUUAA    CGAU  A A  A                      A  AC                 UCGC    UA |
Stem-loop sequence | GGCUAUUUUGUGAGACGAAUCUAACGAGUUAUAUUAAUCCAUAAUUUGCUACAGUAAUUAGCCGCUAAUUAUGGAUUAAUAUACAUCAUUAGAUUCGUCUCGCAAAAUAGACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK107263.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-125-H03, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015781418.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4335446), mRNA | serine/arginine repetitive matrix protein 1(LOC4335446) | coding protein | psRNATarget |