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BaseInfo

ncRNA ID novel_osa_miR203
Species Oryza sativa
Class miRNA
Genome position Chr7:5139107-5139220 [+]
Reference genome IRGSP-1.0
Source SRR1460508
Length 25
Mature sequence(if miRNA) 1 - GGCUAUUUUGUGAGACGAAUCUAAC - 25
Stem-loop(if miRNA) -  -                      C  GU                 ---U    CA
 GG CUAUUUUGUGAGACGAAUCUAA GA  UAUAUUAAUCCAUAAUU    GCUA  G
 || |||||||||||||||||||||| ||  |||||||||||||||||    ||||  U
 UC GAUAAAACGCUCUGCUUAGAUU CU  AUAUAAUUAGGUAUUAA    CGAU  A
A  A                      A  AC                 UCGC    UA
Stem-loop sequence GGCUAUUUUGUGAGACGAAUCUAACGAGUUAUAUUAAUCCAUAAUUUGCUACAGUAAUUAGCCGCUAAUUAUGGAUUAAUAUACAUCAUUAGAUUCGUCUCGCAAAAUAGACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107263.1
ncRNA:25   CAAUCUAAGCAGAGUGUUUUAUCGG   1
  |||||||||||||||=|||||||||
targets:1177   GUUAGAUUCGUCUCAUAAAAUAGCC   1201

1.5 Oryza sativa Japonica Group cDNA clone:002-125-H03, full insert sequence NA coding protein psRNATarget
XM_015781418.1
ncRNA:25   CAAUCUAAGCAGAGUGUUUUAUCGG   1
  |||||||||||||||=|||||||||
targets:1266   GUUAGAUUCGUCUCAUAAAAUAGCC   1290

1.5 PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4335446), mRNA serine/arginine repetitive matrix protein 1(LOC4335446) coding protein psRNATarget