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BaseInfo

ncRNA ID	novel_osa_miR202
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:9212396-9212502 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1743006;SRR1849769;SRR1849772;SRR1849776;SRR2040382;SRR2040384;SRR2040385;SRR2040386;SRR2040390;SRR2040391;SRR2040392;SRR2040393;SRR2040396;SRR2040399;SRR2040401;SRR2040402;SRR2040403;SRR2040405;SRR2040406;SRR2040407;SRR2040408;SRR2098823;SRR2857734;SRR2857735;SRR2857736;SRR3123630;SRR3123645;SRR3123652;SRR3234044;SRR5049778;SRR5049779;SRR5049780;SRR5049786;SRR5049787;SRR5049790;SRR5049791;SRR5049792;SRR5351738;SRR1654491;SRR1738225;SRR1738226;SRR1738227
Length	24
Mature sequence(if miRNA)	1 - AAAAUCAAUUUUUCCAGGCGGACC - 24
Stem-loop(if miRNA)	--       -      C                            C       U   AAAAUCA AUUUUU CAGGCGGACCACUUAAGGGGUUCGCCUG GAAAAUA A   ||||||| |||||| |||||||||||||||||||||||||||| |||||||   UUUUAGU UAAAAA GUUUGCCUGGUGAAUUCCCCAGGUGGAC CUUUUAU U CU       A      A                            A       U
Stem-loop sequence	AAAAUCAAUUUUUCCAGGCGGACCACUUAAGGGGUUCGCCUGCGAAAAUAUAUUUAUUUUCACAGGUGGACCCCUUAAGUGGUCCGUUUGAAAAAAUAUGAUUUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235978.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   |||||||||*|||||||||||||| targets:80   GGUCCGCCUAGAAAAAUUGAUUUU   103 Target Full Sequence	1.0	Sequence 1973 from Patent EP2985353	NA	coding protein	psRNATarget
HI403848.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   |||||||||*|||||||||||||| targets:80   GGUCCGCCUAGAAAAAUUGAUUUU   103 Target Full Sequence	1.0	Sequence 1973 from Patent EP2074227	NA	coding protein	psRNATarget
JB164309.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   |||||||||*|||||||||||||| targets:80   GGUCCGCCUAGAAAAAUUGAUUUU   103 Target Full Sequence	1.0	Sequence 1973 from Patent EP2559767	NA	coding protein	psRNATarget
AK110535.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   ||||=||*|||||||||||||||| targets:867   GGUCUGCGUGGAAAAAUUGAUUUU   890 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-168-A08, full insert sequence	NA	coding protein	psRNATarget
AK289059.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   |||=||||||||||||*||||||| targets:1380   GGUUCGCCUGGAAAAAAUGAUUUU   1403 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090093I21, full insert sequence	NA	coding protein	psRNATarget
AK288182.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   ||||=||*||*||||||||||||| targets:1653   GGUCUGCAUGUAAAAAUUGAUUUU   1676 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence	NA	coding protein	psRNATarget
XM_015780614.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   ***||||||||||||=|||||||* targets:517   CCGCCGCCUGGAAAAGUUGAUUUG   540 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266980 (LOC9266980), transcript variant X4, mRNA	uncharacterized LOC9266980(LOC9266980)	coding protein	psRNATarget
AK073678.1	ncRNA:24   CCAGGCGGACCUUUUUAACUAAAA   1   ***|||||*|*||||||||||||| targets:1124   CAACCGCCAGUAAAAAUUGAUUUU   1147 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033050J03, full insert sequence	NA	coding protein	psRNATarget