ncRNA ID | gba-miR8721c |
Species | Gossypium barbadense |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CAUCGAUAGUUUGAGGAUGUA - NA |
Stem-loop(if miRNA) |
AAC    GAAU        UG          A      C         A   UU   C        A   -CUU  AUA     UU    --    C      CG CC   CU         AAAAA            ------U   -   U UGAAAAUUGAUGUUGUAAAAAUCUUGAUUUCGAGGUUUUCAAAACUUCUAUAAAAG    AUUC    UAUAUCCU  AACUAUUGAU UUAUAU AAUAAAGUC UUU  UUA UAAAAUCA UAA    GC   UUAAA  AGAC  GUCA AUCUCG  U  CAU  UUUAAAAUG     UUUAAAGAAAAA       GAA UAU G                                                        C    ||||    ||||||||  |||||||||| |||||| ||||||||| |||  ||| |||||||| |||    ||   |||||  ||||  |||| ||||||  |  |||  |||||||||     ||||||||||||       ||| ||| |                                                        U    UAAG    AUGUAGGA  UUGAUAGCUA GAUAUA UUAUUUCAG AAG  AAU AUUUUAGU AUU    UG   AAUUU  UCUG  CAGU UAGAGU  A  GUA  AAAUUUUAC     AAAUUUCUUUUU       CAA AGU G                                                        U UUA    -AUU        GU          C      U         G   GU   A        A   AAAU  -GC     --    UA    U      AU UU   UU         CUCUA            UAUUUUG   C   - UAUUGAAAAUUUUCAUUUUUGAUUUAUAUUUCAUUUUUUUUUUUCUCACUUGCUAU |
Stem-loop sequence | AACAUUCGAAUUAUAUCCUUGAACUAUUGAUAUUAUAUCAAUAAAGUCAUUUUUUUACUAAAAUCAAUAACUUGCAUAUUAAAUUAGACGUCACAUCUCGCGUCCCAUCUUUUAAAAUGAAAAAUUUAAAGAAAAAUGAAUAUUGUGAAAAUUGAUGUUGUAAAAAUCUUGAUUUCGAGGUUUUCAAAACUUCUAUAAAAGCUUUAUCGUUCACUCUUUUUUUUUUUACUUUAUAUUUAGUUUUUACUUUUAAAAGUUAUGUGACAACGUUUUAUUUUUUCUUUAAAAUCUCCAUUUUAAAUUAUGUUAUAUGAGAUUUGACAUGUCUUUUAACGGUUAAAUUAAUGAUUUUAAUAAUGGAAGGACUUUAUUUAUAUAGCAUCGAUAGUUUGAGGAUGUAUUAGAAUAUU |