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BaseInfo

ncRNA ID	novel_osa_miR182
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:8597248-8597420 [-]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1742988;SRR1742989;SRR1742990;SRR1742991;SRR1742993;SRR1849771;SRR2040382;SRR2040383;SRR2040384;SRR2040385;SRR2040387;SRR2040388;SRR2040390;SRR2040391;SRR2040394;SRR2040395;SRR2040396;SRR2040399;SRR2040401;SRR2040402;SRR2040404;SRR2040405;SRR2040406;SRR2040407;SRR2040408;SRR2040409;SRR2040410;SRR2040411;SRR2857728;SRR3123630;SRR3123646;SRR3123650;SRR3123651;SRR3123652;SRR5351742;SRR1738209;SRR1738217;SRR1738219;SRR1738221;SRR1738225;SRR1738228;SRR1738239;SRR1738240
Length	24
Mature sequence(if miRNA)	150 - AUUUCCGUGCCAACGUUUGACUGU - 173
Stem-loop(if miRNA)	-AUUUC    -      U                 A     UUUUUUUAUAAUU     ---- U -   UGUUGUUAGAUGAUAAAACAUGAU       CGUG CCAACG UUGACUGUCCGUCUUAU UGAAA             AGUAU    U U CAU                        U       |||| |||||| ||||||||||||||||| |||||             |||||    | | |||                        A       GCAC GGUUGC AACUGGCAGGCAGAAUA ACUUU             AAUAC    U U AAU                        A CCAAAA    A      U                 A     ----------UUU     UUUU - U   UUUUCUAUUCAGUGCGUAUUUCAU
Stem-loop sequence	AUUUCCGUGCCAACGUUUGACUGUCCGUCUUAUAUGAAAUUUUUUUAUAAUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAACAUGAUUAAUACUUUAUGCGUGACUUAUCUUUUUAAUUUUUUUCAUAAUUUUUUCAAAUAAGACGGACGGUCAAUCGUUGGACACGAAAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288529.1	ncRNA:24   UGUCAGUUUGCAACCGUGCCUUUA   1   |||||||||||||||||||||||* targets:217   ACAGUCAAACGUUGGCACGGAAAC   240 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090044M17, full insert sequence	NA	coding protein	psRNATarget
CT827968.1	ncRNA:24   UGUCAGUUUGCAACC-GUGCCUUUA   1   ||=||||||||||||-||||||||| targets:467   ACGGUCAAACGUUGGACACGGAAAU   491 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN031I05, full insert sequence	NA	coding protein	psRNATarget
AK288264.1	ncRNA:24   UGUCAGUUUGCAACC-GUGCCUUUA   1   ||=||||||||||||-||||||||| targets:99   ACGGUCAAACGUUGGGCACGGAAAU   123 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090016E18, full insert sequence	NA	coding protein	psRNATarget
XM_015759207.1	ncRNA:24   UGUCAGUUUGCAACC-GUGCCUUUA   1   ||=||||||||||||-||||||||| targets:58   ACGGUCAAACGUUGGACACGGAAAU   82 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group piriformospora indica-insensitive protein 2 (LOC4323927), mRNA	piriformospora indica-insensitive protein 2(LOC4323927)	coding protein	psRNATarget
XM_015784718.1	ncRNA:24   UGUCAGUUUGCAACCGUGCCUUUA   1   |||||||||=||||||||*||||| targets:1534   ACAGUCAAAUGUUGGCACAGAAAU   1557 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group basic 7S globulin (LOC4326528), mRNA	basic 7S globulin(LOC4326528)	coding protein	psRNATarget
AK288770.1	ncRNA:24   UGUCAGUUUGCAACCGUGCCUUUA   1   |||||||||||||||||||*|||* targets:2452   ACAGUCAAACGUUGGCACGCAAAC   2475 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090067O18, full insert sequence	NA	coding protein	psRNATarget
AK288706.1	ncRNA:24   UGU-CAGUUUGCAACC-GUGCCUUUA   1   |||-||||||||||||-||||||||| targets:2716   ACAAGUCAAACGUUGGGCACGGAAAU   2741 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090061L24, full insert sequence	NA	coding protein	psRNATarget
AK287584.1	ncRNA:24   UGUCAGUUUGCAACCGUGCCUUUA   1   ||=|||||||||||*||||||||* targets:1333   ACGGUCAAACGUUGACACGGAAAC   1356 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065044J10, full insert sequence	NA	coding protein	psRNATarget
XM_015771325.1	ncRNA:24   UGUCAGUUUGCAACCGUGCCUUUA   1   ||=|||||||||||*||||||||* targets:1356   ACGGUCAAACGUUGACACGGAAAC   1379 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein synthesis inhibitor I (LOC4324068), mRNA	protein synthesis inhibitor I(LOC4324068)	coding protein	psRNATarget
AK068180.1	ncRNA:24   UGUCAGUUUGCAACC-GUGCCUUUA   1   |*||*||||||||||-||||||||| targets:458   AAAGACAAACGUUGGACACGGAAAU   482 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013135E14, full insert sequence	NA	coding protein	psRNATarget