ncRNA ID | gba-miR8721a |
Species | Gossypium barbadense |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CAUCGAUAGUUUGAGGAUGUA - NA |
Stem-loop(if miRNA) |
AC                           AA  A   CAAUA    C   CC          CCAUC         C    ACAAGAC       A   U            C     C   -------A        -   UAUAUUGUAAAAAUUUUGGUUUUGGAUGUUUUCAAAACUUUUACAAAAGAUU   AUUCUAAUUACAUUCUCAAACUAUUGA  UU UAU     AGGU AUU  AUUAUUAAAA     AAUUUAAUU UUAA       GUUAGAU UUA GUGGUAUAGUUU AAAUG GAA        UUAAAAAU AAA                                                    U   |||||||||||||||||||||||||||  || |||     |||| |||  ||||||||||     ||||||||| ||||       ||||||| ||| |||||||||||| ||||| |||        |||||||| |||                                                    A   UAAGAUUAAUGUAGGAGUUUGAUAGCU  AA AUA     UUCA UAA  UAAUAAUUUU     UUAAAUUAA AAUU       CGGUUUA AAU CACCGUAUUAAA UUUAC UUU        UUUUCAUU UGC                                                    U UA                           AC  A   AUCAG    C   AA          AACAA         C    GAAUGUA       G   C            U     U   AAAAUUUC        U   AACAGCGUAAUGAAAAUUUCAAUUUUUAUUUUGUUUUUUCUAUUUCACUUAC |
Stem-loop sequence | ACAUUCUAAUUACAUUCUCAAACUAUUGAAAUUAUAUCAAUAAGGUCAUUCCAUUAUUAAAACCAUCAAUUUAAUUCUUAAACAAGACGUUAGAUAUUAUGUGGUAUAGUUUCAAAUGCGAAAUUAAAAAUAAAUAUAUUGUAAAAAUUUUGGUUUUGGAUGUUUUCAAAACUUUUACAAAAGAUUUAUCAUUCACUUUAUCUUUUUUGUUUUAUUUUUAACUUUAAAAGUAAUGCGACAACGUUUUACUUUUCUUUAAAAUUUUCAUUUUAAAUUAUGCCACCUAAGAUUUGGCAUGUAAGUUAACAAUUAAAUUAACAAUUUUAAUAAUAAAAUCACUUGACUAAUAAAACAUCGAUAGUUUGAGGAUGUAAUUAGAAUAU |