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BaseInfo

ncRNA ID	novel_osa_miR168
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:26584624-26584796 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR2040389;SRR2040393;SRR2040408;SRR3123646;SRR3123652;SRR1738228
Length	22
Mature sequence(if miRNA)	1 - UUUUUAUUUGCACUGUUUGACC - 22
Stem-loop(if miRNA)	UUUUUA     ----               A                 --UA    UAUUAUUUAUUUUAU     U    CUU    AU       UUUGC    ACUGUUUGACCAUUC UUUUAUUUAAAGAAUUU    GAAU               UUGUG CUUA   UAUU  C       |||||    ||||||||||||||| |||||||||||||||||    ||||               ||||| ||||   ||||       AAACG    UGACAAACUGGUGAG AGAAUAAGUUUUUUAAA    UUUA               AACAC GAAU   AUGA  C --UGUA     AAAG               C                 CACG    UAUUUUUUAUUUUUU     -    UUC    AA
Stem-loop sequence	UUUUUAUUUGCACUGUUUGACCAUUCAUUUUAUUUAAAGAAUUUUAGAAUUAUUAUUUAUUUUAUUUGUGUCUUACUUUAUUAUCCAAAGUACUUUAAGCACAAUUUUUUAUUUUUUAUAUUUGCACAAAUUUUUUGAAUAAGACGAGUGGUCAAACAGUGAAAGCAAAAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT837645.1	ncRNA:22   CCAGUUUGUCACGUUUAUUUUU   1   |||||||||||||||=|||||* targets:611   GGUCAAACAGUGCAAGUAAAAU   632 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063B15, full insert sequence	NA	coding protein	psRNATarget
XM_015782265.1	ncRNA:22   CCAGUUUGUCACGUUUAUUUUU   1   ***||=|||||||||||||||| targets:558   UUACAGACAGUGCAAAUAAAAA   579 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 (LOC4337746), mRNA	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1(LOC4337746)	coding protein	psRNATarget
CT837700.1	ncRNA:22   CCAGUUUGUCACGUUUAUUUUU   1   **|||||*|||*|||||||||| targets:727   CCUCAAAAAGUACAAAUAAAAA   748 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120G20, full insert sequence	NA	coding protein	psRNATarget