ncRNA ID | novel_osa_miR166 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:21165735-21165837 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1738242;SRR1738244;SRR1742988;SRR1742990;SRR1742991;SRR1555746;SRR1742992;SRR1742993;SRR1742994;SRR1742996;SRR1743000;SRR1743006;SRR2040380;SRR2040392;SRR2040396;SRR1555749;SRR2040408;SRR2040409;SRR2097778;SRR2098557;SRR2098560;SRR1555751;SRR1556011;SRR3123630;SRR3123645;SRR1556014;SRR3123652;SRR3234040;SRR4407954;SRR1556016;SRR4407962;SRR1298766;SRR5049785;SRR5049787;SRR5049790;SRR1556018;SRR5049792;SRR1654490;SRR1654491;SRR1738209;SRR1738210;SRR1738211;SRR1738219;SRR1738222;SRR1738224;SRR1738225;SRR1738226 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGGCUUGUCUUGUUUUGUGUGC - 24 |
Stem-loop(if miRNA) |
--         U                 A     CAC     U   UU GG   AAUGGCUUG CUUGUUUUGUGUGCCAU AAAAA   UAGGC CAG  C  A   ||||||||| ||||||||||||||||| |||||   ||||| |||  |  A   UUACUGAAC GAGCAAAACGCACGGUA UUUUU   GUUCG GUU  G  U UA         C                 G     -AA     -   GU AG |
Stem-loop sequence | AAUGGCUUGUCUUGUUUUGUGUGCCAUAAAAAACACUAGGCUCAGUUCGGAAUGAGUGUUGGCUUGAAUUUUUGAUGGCACGCAAAACGAGCCAAGUCAUUAU |