| ncRNA ID |
novel_osa_miR150 |
| Species |
Oryza sativa |
| Class |
miRNA |
| Genome position |
Chr5:21554560-21554743 [-] |
| Reference genome |
IRGSP-1.0 |
| Source |
SRR1738242;SRR1738243;SRR1738244;SRR1849767;SRR1849769;SRR1849770;SRR1849774;SRR1849776;SRR2040382;SRR2040383;SRR2040386;SRR2040387;SRR2040393;SRR2040394;SRR2040395;SRR2040398;SRR2040399;SRR2040401;SRR2040402;SRR2040407;SRR2040409;SRR2040410;SRR2857728;SRR2857729;SRR2857730;SRR3123652;SRR3123653;SRR1738227
|
| Length |
24 |
| Mature sequence(if miRNA) |
1 - AACGUUGAACAUGAAUAAUGCAAA - 24 |
| Stem-loop(if miRNA) |
-- GAA C C A --A -AAAAUUUAAAAAUA GUCACACAUAAAAUACU
UGU UAUUCGUGU UAACGUUUGACCGU C UCUUAUUUGAAA UUUUAUGA UUUA A
||| ||||||||| |||||||||||||| | |||||||||||| |||||||| ||||
ACG AUAAGUACA GUUGCAAGCUGGCA G AGAAUAAACUUU AAAAUACU GAUA U
AA -UA A A C AAA AAUCAUAAAAAUAAC AUCUACUAUUUUGUACU
|
| Stem-loop sequence |
UGUGAAUAUUCGUGUCUAACGUUUGACCGUCCAUCUUAUUUGAAAAUUUUAUGAAAAAUUUAAAAAUAUUUAGUCACACAUAAAAUACUAUUCAUGUUUUAUCAUCUAAUAGCAAUAAAAAUACUAAUCAUAAAAAAAUUUCAAAUAAGACGAACGGUCGAACGUUGAACAUGAAUAAUGCAAA
|