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BaseInfo

ncRNA ID	novel_osa_miR136
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:1168749-1168889 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR2040394;SRR2040395;SRR2040396;SRR2040408;SRR2040409;SRR2857735;SRR2857736;SRR3123648;SRR3123651;SRR3123652;SRR1738235;SRR1738237;SRR1738240;SRR1738241
Length	21
Mature sequence(if miRNA)	1 - UAUGUUUGACCAAAUUUAUAG - 21
Stem-loop(if miRNA)	--UAU      C              AAAU  U      ACAAAUUAG UU   UGA   U    UUGU       U      GUUUGA CAAAUUUAUAGAAA    UA CGACAU         U  CAU   AUA AACA    AUAUAUU U      |||||| ||||||||||||||    || ||||||         |  |||   ||| ||||    ||||||| G      CAAACU GUUUAAAUAUCUUU    AU GUUGUA         A  GUA   UAU UUGU    UGUAUAA G UAAUU      A              CAAU  C      --------A GG   ---   U    ---U       U
Stem-loop sequence	UAUGUUUGACCAAAUUUAUAGAAAAAAUUAUCGACAUACAAAUUAGUUUCAUUGAAUAUAACAUUGUAUAUAUUUUGGUAAUAUGUUUGUUUUAUAUGGGAAAUGUUGCUAUAACUUUCUAUAAAUUUGAUCAAACUUAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK065802.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   ||||||||||||||||||*|| targets:895   CUAUAAAUUUGGUCAAACUUA   915 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013036O21, full insert sequence	NA	coding protein	psRNATarget
AK063297.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   =||||||*||||||||||=|| targets:1650   UUAUAAACUUGGUCAAACGUA   1670 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-113-E11, full insert sequence	NA	coding protein	psRNATarget
CT835543.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   |||||||*||||||||||*|| targets:685   CUAUAAACUUGGUCAAACUUA   705 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA220L16, full insert sequence	NA	coding protein	psRNATarget
AK068835.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   |||||||*||*|||||||||| targets:1068   CUAUAAACUUAGUCAAACAUA   1088 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013158G20, full insert sequence	NA	coding protein	psRNATarget
XM_015765055.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   |||||||*||||||||||*|| targets:2064   CUAUAAACUUGGUCAAACUUA   2084 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable mixed-linked glucan synthase 7 (LOC9266650), transcript variant X1, mRNA	probable mixed-linked glucan synthase 7(LOC9266650)	coding protein	psRNATarget
AK120387.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   =||||||*||||||||||*|| targets:487   UUAUAAACUUGGUCAAACUUA   507 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013073J05, full insert sequence	NA	coding protein	psRNATarget
AK109666.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   |*||||=|||||||||||*|| targets:1263   CAAUAAGUUUGGUCAAACUUA   1283 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-145-A04, full insert sequence	NA	coding protein	psRNATarget
AK289190.1	ncRNA:21   GAUAUUUAAACCAGUUUGUAU   1   |*||||=|||||||||||*|| targets:1220   CAAUAAGUUUGGUCAAACUUA   1240 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100038P15, full insert sequence	NA	coding protein	psRNATarget