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BaseInfo

ncRNA ID	novel_osa_miR134
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:16128738-16128934 [-]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1738244;SRR2857731;SRR2857732;SRR3123652;SRR1738237;SRR1738241
Length	24
Mature sequence(if miRNA)	1 - AAAAGUUGUAUGUCUUGAUGAGCU - 24
Stem-loop(if miRNA)	--           C                                 C            AC        U   A       CU     A     UUCU   CUCAUCAAGAU UAUAACUUUUAUUUUGGUCAUUUUUUCAUCCGA AAAGUGAUAGUA  AUUGUUCA AAA UUUACAU  AUCUC UUUGU    A   ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||| ||| |||||||  ||||| |||||    U   GAGUAGUUCUG AUGUUGAAAAUAAAACCAGUAAAGAAGUAGGCU UUUCACUAUCAU  UAAUAAGU UUU AAAUGUG  UAGAG GAAUA    A UC           U                                 A            CA        U   C       --     A     UCAA
Stem-loop sequence	CUCAUCAAGAUCUAUAACUUUUAUUUUGGUCAUUUUUUCAUCCGACAAAGUGAUAGUAACAUUGUUCAUAAAAUUUACAUCUAUCUCAUUUGUUUCUAUAAACUAUAAGAGAGAUGUGUAAACUUUUUGAAUAAUACUACUAUCACUUUAUCGGAUGAAGAAAUGACCAAAAUAAAAGUUGUAUGUCUUGAUGAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT829579.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:379   UGCUAAUGCAUCAAAACAUACAACAUUU   406 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN052H03, full insert sequence	NA	coding protein	psRNATarget
AK067488.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:1710   UGCUAAUGCAUCAAAACAUACAACAUUU   1737 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013110D20, full insert sequence	NA	coding protein	psRNATarget
XM_015756758.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:1758   UGCUAAUGCAUCAAAACAUACAACAUUU   1785 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At2g33490 (LOC4347532), transcript variant X1, mRNA	uncharacterized protein At2g33490(LOC4347532)	coding protein	psRNATarget
XM_015756759.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:1767   UGCUAAUGCAUCAAAACAUACAACAUUU   1794 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At2g33490 (LOC4347532), transcript variant X2, mRNA	uncharacterized protein At2g33490(LOC4347532)	coding protein	psRNATarget