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BaseInfo

ncRNA ID	novel_osa_miR127
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:21497863-21498037 [-]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1743002;SRR1849772;SRR1849774;SRR2040387;SRR2040389;SRR2040394;SRR2040395;SRR2040400;SRR2040405;SRR2040410;SRR2040411;SRR2857735;SRR3123646;SRR3123652;SRR5049781;SRR5049787;SRR5049791;SRR5049792;SRR1738217;SRR1738224;SRR1738228
Length	24
Mature sequence(if miRNA)	152 - GACUUUUUGAUAAACGUUUGACCU - 175
Stem-loop(if miRNA)	--           A           U           A     AA  A     U     -UU     -UA UG  A     --UU   CA   GACUUUUUGAU AACGUUUGACC UUCGUCUUAUU AAAAA  UU UGUAA UAUAA   UAUUU   U  UG CUUGA    UAU  U   ||||||||||| ||||||||||| ||||||||||| |||||  || ||||| |||||   |||||   |  || |||||    |||   CUGAAAAAUUG UUGCAAACUGG GAGCAGAAUAA UUUUU  AA ACGUU AUAUU   AUGAA   A  AC GAAUU    AUA  C AA           G           U           A     AA  C     U     UUU     UAC GU  -     UCUU   AA
Stem-loop sequence	GACUUUUUGAUAAACGUUUGACCUUUCGUCUUAUUAAAAAAAAUUAUGUAAUUAUAAUUUAUUUUAUUGUGACUUGAUUUAUCAUCAAAUAUUCUUUAAGCAUGACAUAAGUAUUUUUAUAUUUGCACAAAAUUUUUAAAUAAGACGAGUGGUCAAACGUUGGUUAAAAAGUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT835080.1	ncRNA:24   UCCAGUUUGCAAAUAGUUUUUCAG   1   |||||||||||||=|||||||||| targets:1133   AGGUCAAACGUUUGUCAAAAAGUC   1156 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN071I07, full insert sequence	NA	coding protein	psRNATarget
AK068361.1	ncRNA:24   UCCAGUUUGCAAAUAGUUUUUCAG   1   **|||||||||||||||||||||| targets:743   UAGUCAAACGUUUAUCAAAAAGUC   766 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013146F13, full insert sequence	NA	coding protein	psRNATarget
AK288703.1	ncRNA:24   UCCAGUUUGCAAAUAGUUUUUCAG   1   ||*|||||=||||=|||||||||| targets:3206   AGAUCAAAUGUUUGUCAAAAAGUC   3229 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090061G13, full insert sequence	NA	coding protein	psRNATarget
AK241447.1	ncRNA:24   UC-CAGUUUGCAAAUAGUUUUUCAG   1   ||-|*|||||*|||||||||||||= targets:1954   AGAGCCAAACAUUUAUCAAAAAGUU   1978 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065163F05, full insert sequence	NA	coding protein	psRNATarget