ncRNA ID | novel_osa_miR124 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:27647654-27647759 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738242;SRR1849771;SRR1849774;SRR2040386;SRR2040391;SRR2040394;SRR2040399;SRR2040404;SRR2040406;SRR2040407;SRR2857728;SRR2857729;SRR2857731;SRR3123652;SRR5049791;SRR1738227 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUGCGAGAUGUAUAAGUUGAAUU - 23 |
Stem-loop(if miRNA) |
--      C  C                  --       U    UUGAA  UGC   UUCAAC UA ACAUCUCGUAACAAAAAA  AUAAAUU AACU     UA   G   |||||| || ||||||||||||||||||  ||||||| ||||     ||   AAGUUG AU UGUAGAGCGUUGUUUUUU  UAUUUAA UUGA     AU   U UU      A  A                  UU       U    UGUUG  CAU |
Stem-loop sequence | UUCAACCUACACAUCUCGUAACAAAAAAAUAAAUUUAACUUUGAAUAUGCGUUACUAGUUGUAGUUUAAUUUAUUUUUUUUUGUUGCGAGAUGUAUAAGUUGAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015793191.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X1, mRNA | probable receptor-like protein kinase At1g67000(LOC4327950) | coding protein | psRNATarget | |||||||||
XM_015793197.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X2, mRNA | probable receptor-like protein kinase At1g67000(LOC4327950) | coding protein | psRNATarget | |||||||||
XM_015792915.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 89B1 (LOC4345896), transcript variant X1, mRNA | UDP-glycosyltransferase 89B1(LOC4345896) | coding protein | psRNATarget |