ncRNA ID | novel_osa_miR123 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:5100844-5100975 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1738242;SRR3123652 |
Length | 18 |
Mature sequence(if miRNA) | 115 - CCUUCGGUGCUGGAACAU - 132 |
Stem-loop(if miRNA) |
--  -G          --A  AAAUAGCA  -       G A    -   AA     AAC     CAAAA   GU  UAGCACCGGA   UC        CA GUUGCGG U UAGA GUU  CAGGA   GUACC     C   ||  ||||||||||   ||        || ||||||| | |||| |||  |||||   |||||     A   CA  GUCGUGGCUU   AG        GU CAACGUC G GUCU CGA  GUCUU   CGUGG     A UA  AG          CCG  CACAGUUA  A       G C    U   --     --A     UCUAC |
Stem-loop sequence | GUGUAGCACCGGAAUCAAAUAGCACAGUUGCGGGUAUAGAGUUAACAGGAAACGUACCCAAAACAACAUCUGGUGCAUUCUGAGCUUCUGCGGCUGCAACAUGAUUGACACGAGCCUUCGGUGCUGGAACAU |