| ncRNA ID | novel_osa_miR117 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:27294453-27294605 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1738242;SRR3123652 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UCAGCAUUUGACCGUUCGUCU - 21 |
| Stem-loop(if miRNA) |
-- - A C UU C ------------------A UU --AUUA - U UAG UC AGC UUUGA CG CGU UUAUUUG AAAAAA UUAUG GUAUU UUUAU GUUUU A || ||| ||||| || ||| ||||||| |||||| ||||| ||||| ||||| ||||| AG UUG AAAUU GU GCA AAUAAAU UUUUUU AGUAC UAUAA AAGUG CAAAA U AC A C A GG U GUUCUUUAUAUUUUUUUUA UC GCAGUG U - UAG |
| Stem-loop sequence | UCAGCAUUUGACCGUUCGUCUUAUUUGAAAAAAAUUUUAUGAUUAGUAUUUUUAUUGUUUUUAGAUGAUAAAACGUGAAUAAUAUGUGACGCAUGACUUUUUUUAUUUUUUUUAUAUUUCUUGUAAAUAAUACGGGUGAUUAAACGUUAGACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015787200.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group ras-related protein RABA3 (LOC4342063), transcript variant X2, mRNA | ras-related protein RABA3(LOC4342063) | coding protein | psRNATarget | |||||||||
| XM_015787201.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group ras-related protein RABA3 (LOC4342063), transcript variant X3, mRNA | ras-related protein RABA3(LOC4342063) | coding protein | psRNATarget |