ncRNA ID | gba-miR8709e |
Species | Gossypium barbadense |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - AUACAUGAAUUUUGAUUUAA - NA |
Stem-loop(if miRNA) |
C      A                A  U          GUCU       GCUUU    UU   UCUUU                    --------AA     -    UUCAUUUUUCACAAAUCACUAAUAACAUUAUCGAAUCAACACAAUUUUAUGUUGAUAUUACAUACACAAACAAUUAUA  AUUAAA UUAUACAUGAAUUUUG UU AAUGUGUAAU    UAUGUGA     GUUU  UUU     UUACGGUUUUAUACAUGAAA          UUGAU UUGA                                                                              U  |||||| |||||||||||||||| || ||||||||||    |||||||     ||||  |||     ||||||||||||||||||||          ||||| ||||  UAAUUU AAUAUGUACUUAAAAC AG UUACACAUUG    AUGUAUU     UAAA  AAA     GAUGUUAAAAUAUGUACUUU          UCAAG AUAC                                                                              U A      A                C  U          AACU       -----    UU   -CCAC                    GAACUUAAUA     U    AUAUGUAUUUUGAAACUAAAAUUAAGUUAACAUUUGUAAAUUUUUUUACUUACGUAUAUAAAUAAAAGUAUAAUCUAA |
Stem-loop sequence | CAUUAAAAUUAUACAUGAAUUUUGAUUUAAUGUGUAAUGUCUUAUGUGAGCUUUGUUUUUUUUUCUUUUUACGGUUUUAUACAUGAAAAAUUGAUUUGAUUCAUUUUUCACAAAUCACUAAUAACAUUAUCGAAUCAACACAAUUUUAUGUUGAUAUUACAUACACAAACAAUUAUAUUAAUCUAAUAUGAAAAUAAAUAUAUGCAUUCAUUUUUUUAAAUGUUUACAAUUGAAUUAAAAUCAAAGUUUUAUGUAUACAUAUGAACUAUAAUUCAAGUUUCAUGUAUAAAAUUGUAGCACCAAAUUAAAUUUAUGUAUCAAGUUACACAUUUGACCAAAAUUCAUGUAUAAAUUUAAUA |