ncRNA ID | novel_osa_miR70 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:19573936-19574154 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1460508 |
Length | 27 |
Mature sequence(if miRNA) | 1 - GGAGUAUUAAACGUAGAUUACUGACAA - 27 |
Stem-loop(if miRNA) |
--                        C      C                                       C  G                  U  UACAG    -  U   GGAGUAUUAAACGUAGAUUACUGA AAAACC AUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAA GA GUAUAUUAAUCCAUGAUU GC     UGAU GC A   |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||     |||| ||   CCUCAUAAUUUGCAUCUAAUGGCU UUUUGG UAAGGUAUUGGGGAUCCGAUAAAACGCUCUGCUUAGAUU CU CAUAUAAUUAGGUAUUAA CG     ACUA UG C AU                        A      C                                       A  A                  U  --CCG    A  A |
Stem-loop sequence | GGAGUAUUAAACGUAGAUUACUGACAAAACCCAUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAACGAGGUAUAUUAAUCCAUGAUUUGCUACAGUGAUGCUACAGUAAUCAGCCGCUAAUUAUGGAUUAAUAUACAUCAUUAGAUUCGUCUCGCAAAAUAGCCUAGGGGUUAUGGAAUCGGUUUUAUCGGUAAUCUACGUUUAAUACUCCUA |