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BaseInfo

ncRNA ID novel_osa_miR69
Species Oryza sativa
Class miRNA
Genome position Chr1:23468880-23468929 [-]
Reference genome IRGSP-1.0
Source SRR1738242;SRR1743002;SRR2040389;SRR2099746;SRR3123645;SRR3123650;SRR3123652;SRR5351737;SRR5351738;SRR5351740;SRR1738212;SRR1738214;SRR1738216;SRR1738217;SRR1738219;SRR1738221;SRR1738226;SRR1738239
Length 24
Mature sequence(if miRNA) 27 - CAGGAUCAAACUGACUGGCAUGCC - 50
Stem-loop(if miRNA) --          -C   C   C   C
  CAGGAUCAAA  UGA UGG AUG C
  ||||||||||  ||| ||| |||
  GUCCUGGUUU  ACU ACU UAC C
AC          AU   -   C   A
Stem-loop sequence CAGGAUCAAACUGACUGGCAUGCCCACAUCUCAUCAUAUUUGGUCCUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289121.1
ncRNA:24   CCGUACGGUCAGUCAAACUAGGAC   1
  |||=||||||||||||||||||||
targets:1724   GGCGUGCCAGUCAGUUUGAUCCUG   1747

0.0 Oryza sativa Japonica Group cDNA, clone: J090097J21, full insert sequence NA coding protein psRNATarget
AK288795.1
ncRNA:24   CCGUACGGUCAGUCAAACUAGGAC   1
  |||=||||||||||||||||||||
targets:2891   GGCGUGCCAGUCAGUUUGAUCCUG   2914

0.0 Oryza sativa Japonica Group cDNA, clone: J090070D09, full insert sequence NA coding protein psRNATarget
AK288391.1
ncRNA:24   CCGUACGGUCAGUCAAACUAGGAC   1
  |||=||||||||||||||||=|||
targets:76   GGCGUGCCAGUCAGUUUGAUUCUG   99

1.5 Oryza sativa Japonica Group cDNA, clone: J090027H03, full insert sequence NA coding protein psRNATarget