ncRNA ID | novel_osa_miR69 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:23468880-23468929 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738242;SRR1743002;SRR2040389;SRR2099746;SRR3123645;SRR3123650;SRR3123652;SRR5351737;SRR5351738;SRR5351740;SRR1738212;SRR1738214;SRR1738216;SRR1738217;SRR1738219;SRR1738221;SRR1738226;SRR1738239 |
Length | 24 |
Mature sequence(if miRNA) | 27 - CAGGAUCAAACUGACUGGCAUGCC - 50 |
Stem-loop(if miRNA) |
--          -C   C   C   C   CAGGAUCAAA  UGA UGG AUG C   ||||||||||  ||| ||| |||   GUCCUGGUUU  ACU ACU UAC C AC          AU   -   C   A |
Stem-loop sequence | CAGGAUCAAACUGACUGGCAUGCCCACAUCUCAUCAUAUUUGGUCCUGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289121.1 |
|
0.0 | Oryza sativa Japonica Group cDNA, clone: J090097J21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288795.1 |
|
0.0 | Oryza sativa Japonica Group cDNA, clone: J090070D09, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288391.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090027H03, full insert sequence | NA | coding protein | psRNATarget |