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BaseInfo

ncRNA ID	novel_osa_miR67
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:28901755-28901810 [-]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR3123652;SRR5351739
Length	23
Mature sequence(if miRNA)	34 - CAAUAUGUUGGUAGUGCCAAACU - 56
Stem-loop(if miRNA)	--   UA                CU  A   CAA  UGUUGGUAGUGCCAAA  CU G   |||  ||||||||||||||||  || C   GUU  AUAAUCAUCACGGUUU  GA C UG   UC                -U  A
Stem-loop sequence	CAAUAUGUUGGUAGUGCCAAACUCUAGCCAAGUUUUGGCACUACUAAUACUUUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI404208.1	ncRNA:23   UCAAACCGUGAUGGUUGUAUAAC   1   ||||||||||||||||=|||||| targets:163   AGUUUGGCACUACCAAUAUAUUG   185 Target Full Sequence	1.5	Sequence 2333 from Patent EP2074227	NA	coding protein	psRNATarget
JB164669.1	ncRNA:23   UCAAACCGUGAUGGUUGUAUAAC   1   ||||||||||||||||=|||||| targets:163   AGUUUGGCACUACCAAUAUAUUG   185 Target Full Sequence	1.5	Sequence 2333 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236338.1	ncRNA:23   UCAAACCGUGAUGGUUGUAUAAC   1   ||||||||||||||||=|||||| targets:163   AGUUUGGCACUACCAAUAUAUUG   185 Target Full Sequence	1.5	Sequence 2333 from Patent EP2985353	NA	coding protein	psRNATarget
CT827997.1	ncRNA:23   UCAAACCGUGAUGGUUGUAUAAC   1   ||||||||||||||||=|||||| targets:680   AGUUUGGCACUACCAAUAUAUUG   702 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032F03, full insert sequence	NA	coding protein	psRNATarget
AK069770.1	ncRNA:23   UCAAACCGUGAUGGUUGUAUAAC   1   ||||||||||||||||=|||||| targets:1444   AGUUUGGCACUACCAAUAUAUUG   1466 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023029J24, full insert sequence	NA	coding protein	psRNATarget
AK063395.1	ncRNA:23   UCAAACCGUGAUGGUUGUAUAAC   1   ||||||||||||||||=|||||| targets:778   AGUUUGGCACUACCAAUAUAUUG   800 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-114-H07, full insert sequence	NA	coding protein	psRNATarget
XM_015784200.1	ncRNA:23   UC--AAACCGUGAUGGUUGUAUAAC   1   ||--|||||||||||||||||*||| targets:313   AGGUUUUGGCACUACCAACAUUUUG   337 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339467 (LOC4339467), transcript variant X1, mRNA	uncharacterized LOC4339467(LOC4339467)	coding protein	psRNATarget
AK288255.1	ncRNA:23   UCAAACCGUGAUGGUUGUAUAAC   1   |*||*|||||||||||||*|||| targets:1473   AAUUCGGCACUACCAACAAAUUG   1495 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090015K18, full insert sequence	NA	coding protein	psRNATarget