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BaseInfo

ncRNA ID	novel_osa_miR64
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:5716747-5716850 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR3123652
Length	21
Mature sequence(if miRNA)	1 - UAUUUUACCAUUUUCUGUAUU - 21
Stem-loop(if miRNA)	--    U  CC      UG       C                    C UAU   UAUU UA  AUUUUC  UAUUUAU UUGAUGUUAGUGAAUCUAGA A   A   |||| ||  ||||||  ||||||| |||||||||||||||||||| |   GUAA AU  UAAAGG  GUAAGUA AACUACAAUUACUUAGAUCU U   U CA    U  CA      GU       U                    A UAA
Stem-loop sequence	UAUUUUACCAUUUUCUGUAUUUAUCUUGAUGUUAGUGAAUCUAGACAUAUAUAAUUAUCUAGAUUCAUUAACAUCAAUAUGAAUGUGGGAAAUACUAUAAUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK066161.1	ncRNA:21   UUAUGUCUUUUACCAUUUUAU   1   ***|||||||||||||||||* targets:1473   CUAACAGAAAAUGGUAAAAUU   1493 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013052F22, full insert sequence	NA	coding protein	psRNATarget
XM_015784300.1	ncRNA:21   UUAUGUCUUUUACCAUUUUAU   1   ***|||||||||||||||||* targets:1494   CUAACAGAAAAUGGUAAAAUU   1514 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group arginine--tRNA ligase, chloroplastic/mitochondrial (LOC4337898), transcript variant X2, mRNA	arginine--tRNA ligase, chloroplastic/mitochondrial(LOC4337898)	coding protein	psRNATarget
XM_015784299.1	ncRNA:21   UUAUGUCUUUUACCAUUUUAU   1   ***|||||||||||||||||* targets:1547   CUAACAGAAAAUGGUAAAAUU   1567 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group arginine--tRNA ligase, chloroplastic/mitochondrial (LOC4337898), transcript variant X1, mRNA	arginine--tRNA ligase, chloroplastic/mitochondrial(LOC4337898)	coding protein	psRNATarget