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BaseInfo

ncRNA ID novel_osa_miR59
Species Oryza sativa
Class miRNA
Genome position Chr6:12982740-12982948 [+]
Reference genome IRGSP-1.0
Source SRR1460508
Length 27
Mature sequence(if miRNA) 1 - UUUAAUGUAUGACGCUGUUGACUUUUA - 27
Stem-loop(if miRNA) --               U          -AU   -     G      C  U     ----------AAA        UU        U    -    UU U   --     U
  UUUAAUGUAUGACGC GUUGACUUUU   AGA CGUUU ACUAUU GU UUAUU             AAAUGUAA  AUGUUUAU UUAU UUUA  G GAC  UUGAU U
  ||||||||||||||| ||||||||||   ||| ||||| |||||| || |||||             ||||||||  |||||||| |||| ||||  | |||  ||||| A
  AAAUUACAUAUUGCG UAACUGAAAA   UCU GCAAA UGGUAA CA AAUAA             UUUAUAUU  UAUAAAUA AGUA GAAU  C UUG  AGCUA U
UU               U          AAU   U     A      A  U     GUUAAAAAAAAUA        UU        U    C    UU -   UA     C
Stem-loop sequence UUUAAUGUAUGACGCUGUUGACUUUUAUAGACGUUUGACUAUUCGUUUUAUUAAAAAAUGUAAUUAUGUUUAUUUUAUUUUAUUGUGACUUGAUUUAUCAUCGAAUGUUCUUUAAGCAUGAUAUAAAUAUUUUUAUAUUUAUAAAAAAAAUUGAAUAAUACAAAUGGUAAAACGUUCUUAAAAAAGUCAAUUGCGUUAUACAUUAAAUU