ncRNA ID | novel_osa_miR59 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:12982740-12982948 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1460508 |
Length | 27 |
Mature sequence(if miRNA) | 1 - UUUAAUGUAUGACGCUGUUGACUUUUA - 27 |
Stem-loop(if miRNA) |
--               U          -AU   -     G      C  U     ----------AAA        UU        U    -    UU U   --     U   UUUAAUGUAUGACGC GUUGACUUUU   AGA CGUUU ACUAUU GU UUAUU             AAAUGUAA  AUGUUUAU UUAU UUUA  G GAC  UUGAU U   ||||||||||||||| ||||||||||   ||| ||||| |||||| || |||||             ||||||||  |||||||| |||| ||||  | |||  ||||| A   AAAUUACAUAUUGCG UAACUGAAAA   UCU GCAAA UGGUAA CA AAUAA             UUUAUAUU  UAUAAAUA AGUA GAAU  C UUG  AGCUA U UU               U          AAU   U     A      A  U     GUUAAAAAAAAUA        UU        U    C    UU -   UA     C |
Stem-loop sequence | UUUAAUGUAUGACGCUGUUGACUUUUAUAGACGUUUGACUAUUCGUUUUAUUAAAAAAUGUAAUUAUGUUUAUUUUAUUUUAUUGUGACUUGAUUUAUCAUCGAAUGUUCUUUAAGCAUGAUAUAAAUAUUUUUAUAUUUAUAAAAAAAAUUGAAUAAUACAAAUGGUAAAACGUUCUUAAAAAAGUCAAUUGCGUUAUACAUUAAAUU |