ncRNA ID | novel_osa_miR49 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:26691607-26691805 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1738242;SRR1849772;SRR2040401;SRR2040409;SRR3123652;SRR1738212;SRR1738216;SRR1738219 |
Length | 24 |
Mature sequence(if miRNA) | 176 - ACGUAGAUUACCGAUAAAACCGAU - 199 |
Stem-loop(if miRNA) |
--  G        C         G           C    A             C    A      U           C      ---A    C    UAC   AC UAGAUUAC GAUAAAACC AUUCUAUAACC CUAG CUAUUUUGCGAGA GAAU UAAUGA GUAUAUUAAUC AUGAUU    GCGG UGAU   U   || |||||||| ||||||||| ||||||||||| |||| ||||||||||||| |||| |||||| ||||||||||| ||||||    |||| ||||   G   UG AUCUAAUG CUGUUUUGG UAAGGUAUUGG GAUC GAUAAAACGCUCU CUUA AUUACU CAUAUAAUUAG UACUAA    UGUC ACUA   U UU  G        A         G           C    C             A    G      C           A      GCGA    -    CGA |
Stem-loop sequence | ACGUAGAUUACCGAUAAAACCGAUUCUAUAACCCCUAGACUAUUUUGCGAGACGAAUAUAAUGAUGUAUAUUAAUCCAUGAUUAGCGGCUGAUUACUGUAGCAUCACUGUAGCGAAUCAUAGAUUAAUAUACCUCAUUAGAUUCAUCUCGCAAAAUAGCCUAGCGGUUAUGGAAUGGGUUUUGUCAGUAAUCUAGGUUU |