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BaseInfo

ncRNA ID novel_osa_miR48
Species Oryza sativa
Class miRNA
Genome position Chr6:14282804-14283023 [-]
Reference genome IRGSP-1.0
Source SRR1460508
Length 27
Mature sequence(if miRNA) 194 - GGAGUAUUAAACGUAGAUUACUGACAA - 220
Stem-loop(if miRNA) --                               C                 CUA                    C  G                  U  UACAG    -  U
  GGAGUAUUAAACGUAGAUUACUGACAAAACC AUUCCAUAACCCCUAGG   GUUUUGCGAGACGAAUCUAA GA GUAUAUUAAUCCAUAAUU GC     UGAU GC A
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  CCUCAUAAUUUGCAUCUAAUGGCUGUUUUGG UAAGGUAUUGGGGAUCC   UAAAACGCUCUGUUUAGAUU CU CAUAUAAUUAGGUAUUAA CG     ACUA UG C
AU                               C                 -AA                    A  A                  U  --CCG    A  A
Stem-loop sequence GGAGUAUUAAACGUAGAUUACUGACAAAACCCAUUCCAUAACCCCUAGGCUAGUUUUGCGAGACGAAUCUAACGAGGUAUAUUAAUCCAUAAUUUGCUACAGUGAUGCUACAGUAAUCAGCCGCUAAUUAUGGAUUAAUAUACAUCAUUAGAUUUGUCUCGCAAAAUAACCUAGGGGUUAUGGAAUCGGUUUUGUCGGUAAUCUACGUUUAAUACUCCUA