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BaseInfo

ncRNA ID	novel_osa_miR34
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:8324338-8324534 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR1738244;SRR2857731;SRR2857733;SRR3123648;SRR3123651;SRR3123652;SRR1738235;SRR1738240;SRR1738241
Length	24
Mature sequence(if miRNA)	174 - AAAAGUUGUAUGUCUUGAUGAGCU - 197
Stem-loop(if miRNA)	--           C                                 C   G    U    C   GUA      A       UUA    AUU     U   CUCAUUAAGAU UAUAACUUUUAUUUUGGUCAUUUCUUCAUCCGA AAA UGAU AUAA AUU   CACAAA UUUGCAU   UCUC   UGGUU A   ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| |||| |||   |||||| |||||||   ||||   ||||| U   GAGUAGUUCUG AUGUUGAAAAUAAAACCAGUAAAGAAGUAGGCU UUU ACUA UAUU UAA   GUGUUU AAAUGUA   AGAG   AUCAA U UC           U                                 A   A    U    A   AAA      C       UAG    AAU     A
Stem-loop sequence	CUCAUUAAGAUCUAUAACUUUUAUUUUGGUCAUUUCUUCAUCCGACAAAGUGAUUAUAACAUUGUACACAAAAUUUGCAUUUAUCUCAUUUGGUUUAUUAAACUAUAAGAGAGAUAUGUAAACUUUGUGAAAAAUAUUAUUAUCAAUUUAUCGGAUGAAGAAAUGACCAAAAUAAAAGUUGUAUGUCUUGAUGAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT829579.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:379   UGCUAAUGCAUCAAAACAUACAACAUUU   406 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN052H03, full insert sequence	NA	coding protein	psRNATarget
AK067488.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:1710   UGCUAAUGCAUCAAAACAUACAACAUUU   1737 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013110D20, full insert sequence	NA	coding protein	psRNATarget
XM_015756758.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:1758   UGCUAAUGCAUCAAAACAUACAACAUUU   1785 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At2g33490 (LOC4347532), transcript variant X1, mRNA	uncharacterized protein At2g33490(LOC4347532)	coding protein	psRNATarget
XM_015756759.1	ncRNA:24   UCGA----GUAGUUCUGUAUGUUGAAAA   1   *|||----||||||*|||||||||*||| targets:1767   UGCUAAUGCAUCAAAACAUACAACAUUU   1794 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At2g33490 (LOC4347532), transcript variant X2, mRNA	uncharacterized protein At2g33490(LOC4347532)	coding protein	psRNATarget