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BaseInfo

ncRNA ID	novel_osa_miR11
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:21166687-21166741 [+]
Reference genome	IRGSP-1.0
Source	SRR1738242;SRR3123652
Length	22
Mature sequence(if miRNA)	1 - UAUCUCGAGAUAUCGGUACCUC - 22
Stem-loop(if miRNA)	--     CG  A              GG   UAUCU  AG UAUCGGUACCUCAU  U   |||||  || ||||||||||||||   AUGGA  UC AUGGCCAUGGAGUG  A UC     -A  C              UC
Stem-loop sequence	UAUCUCGAGAUAUCGGUACCUCAUGGUACUGUGAGGUACCGGUACCUAAGGUACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI404159.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:113   GAGGUACCGAUACCUCGAGAUA   134 Target Full Sequence	1.5	Sequence 2284 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236289.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:113   GAGGUACCGAUACCUCGAGAUA   134 Target Full Sequence	1.5	Sequence 2284 from Patent EP2985353	NA	coding protein	psRNATarget
JB164620.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:113   GAGGUACCGAUACCUCGAGAUA   134 Target Full Sequence	1.5	Sequence 2284 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015786123.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:742   GAGGUACCGAUACCUCGAGAUA   763 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
XM_015763409.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:1593   GAGGUACCGAUACCUCGAGAUA   1614 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351882 (LOC4351882), mRNA	uncharacterized LOC4351882(LOC4351882)	coding protein	psRNATarget
AK065859.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:1595   GAGGUACCGAUACCUCGAGAUA   1616 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013043N06, full insert sequence	NA	coding protein	psRNATarget
AK287529.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:253   GAGGUACCGAUACCUCGAGAUA   274 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:22   CUCCAUGGCUAUAGAGCUCUAU   1   ||||||||||||*||||||||| targets:253   GAGGUACCGAUACCUCGAGAUA   274 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget