ncRNA ID | novel_lus_miR745 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold641:526445-526657 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996369 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCGGCCAAUUUGACAGCUCA - 21 |
Stem-loop(if miRNA) |
-   G       U            -  C          -    -UAAUC             C      AC                UA      -UCA      AG  UCC GCCAAUU GACAGCUCAUCA CG CACGUAAUCU AAAU      GUUCUUUAAUAGU UAACCC  CCGACCGAAUACUGGU  AGAACU    GGAUUA  U  ||| ||||||| |||||||||||| || |||||||||| ||||      ||||||||||||| ||||||  ||||||||||||||||  ||||||    ||||||  AGG CGGUUAA CUGUCGAGUAGU GC GUGUAUUAGA UUUA      CAAGAAAUUGUCA AUUGGG  GGCUGGCUUGUGACCA  UCUUGA    CCUAAU  U A   G       C            U  C          C    UAUAAU             U      GU                GC      CCAA      AC |
Stem-loop sequence | UCCGGCCAAUUUGACAGCUCAUCACGCCACGUAAUCUAAAUUAAUCGUUCUUUAAUAGUCUAACCCACCCGACCGAAUACUGGUUAAGAACUUCAGGAUUAAGUUCAUAAUCCAACCAGUUCUCGACCAGUGUUCGGUCGGUGGGGUUAUACUGUUAAAGAACUAAUAUAUUUCAGAUUAUGUGCCGUUGAUGAGCUGUCCAAUUGGCGGGAA |