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BaseInfo

ncRNA ID novel_lus_miR743
Species Linum usitatissimum
Class miRNA
Genome position scaffold57:1242347-1242562 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996369
Length 23
Mature sequence(if miRNA) 1 - AAUAUUUAGCAUGCAUGUCGGGA - 23
Stem-loop(if miRNA) --       AG    C    C  -   UGACUUAU       G    UAC   UUAA   -GUU        A                  AAU     AUUCAACACUA
  AAUAUUU  CAUG AUGU GG GAA        AAUCGAG UUUC   AUG    GCC    UAAGUAAU GUCAAAUGAAGUUAAAAA   AUUUU           A
  |||||||  |||| |||| || |||        ||||||| ||||   |||    |||    |||||||| ||||||||||||||||||   |||||           U
  UUAUAAA  GUAC UACA CC CUU        UUAGUUC GAAG   UAC    UGG    AUUUAUUA CAGUUUGCUUCAAUUUUU   UAAAA           A
GA       CU    A    A  U   CCAAUUUU       -    UAA   --CA   AUAU        C                  AGU     CUAUACACAAU
Stem-loop sequence AAUAUUUAGCAUGCAUGUCGGGAAUGACUUAUAAUCGAGGUUUCUACAUGUUAAGCCGUUUAAGUAAUAGUCAAAUGAAGUUAAAAAAAUAUUUUAUUCAACACUAAUAUAACACAUAUCAAAAUUGAUUUUUAACUUCGUUUGACCAUUAUUUAUAUAGGUACCAUAAUGAAGCUUGAUUUUUUAACCUUCUCCAACAUACAUGUCAAAUAUUAG