ncRNA ID | novel_lus_miR743 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold57:1242347-1242562 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996369 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAUAUUUAGCAUGCAUGUCGGGA - 23 |
Stem-loop(if miRNA) |
--       AG    C    C  -   UGACUUAU       G    UAC   UUAA   -GUU        A                  AAU     AUUCAACACUA   AAUAUUU  CAUG AUGU GG GAA        AAUCGAG UUUC   AUG    GCC    UAAGUAAU GUCAAAUGAAGUUAAAAA   AUUUU           A   |||||||  |||| |||| || |||        ||||||| ||||   |||    |||    |||||||| ||||||||||||||||||   |||||           U   UUAUAAA  GUAC UACA CC CUU        UUAGUUC GAAG   UAC    UGG    AUUUAUUA CAGUUUGCUUCAAUUUUU   UAAAA           A GA       CU    A    A  U   CCAAUUUU       -    UAA   --CA   AUAU        C                  AGU     CUAUACACAAU |
Stem-loop sequence | AAUAUUUAGCAUGCAUGUCGGGAAUGACUUAUAAUCGAGGUUUCUACAUGUUAAGCCGUUUAAGUAAUAGUCAAAUGAAGUUAAAAAAAUAUUUUAUUCAACACUAAUAUAACACAUAUCAAAAUUGAUUUUUAACUUCGUUUGACCAUUAUUUAUAUAGGUACCAUAAUGAAGCUUGAUUUUUUAACCUUCUCCAACAUACAUGUCAAAUAUUAG |