ncRNA ID | novel_lus_miR733 |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | scaffold462:412592-412773 [+] |
Reference genome | Lusitatissimum_200_BGIv1.0 |
Source | SRR2996369 |
Length | 24 |
Mature sequence(if miRNA) | 159 - AUAUGUUGGGAAUGGCUAAAAAUU - 182 |
Stem-loop(if miRNA) |
--    G         G      C  A         A U   -   G  AC    AA       UUCU      G   U       U   UU   UUUU AGCCAUUUU AACAUG AU UCAAAUAUU G CGA UUU AA  UUUU  AAUUUUC    UAAAAU GUC GUUUUCA AGG  A   |||| ||||||||| |||||| || ||||||||| | ||| ||| ||  ||||  |||||||    |||||| ||| ||||||| |||   AAAA UCGGUAAGG UUGUAU UA AGUUUAUAA C GCU GAA UU  AAAA  UUAAAAG    GUUUUA CAG UAAAAGU UCC  A UU    A         G      A  C         - U   U   G  AA    AA       UACU      A   U       U   CC |
Stem-loop sequence | UUUUGAGCCAUUUUGAACAUGCAUAUCAAAUAUUAGUCGAUUUGAAACUUUUAAAAUUUUCUUCUUAAAAUGGUCUGUUUUCAUAGGUUAACCCCUUUGAAAAUUGACAAUUUUGUCAUGAAAAUUAAAAAAAAUUGAAGUUCGUCAAUAUUUGACAUAUAUGUUGGGAAUGGCUAAAAAUU |