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BaseInfo

ncRNA ID novel_lus_miR733
Species Linum usitatissimum
Class miRNA
Genome position scaffold462:412592-412773 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996369
Length 24
Mature sequence(if miRNA) 159 - AUAUGUUGGGAAUGGCUAAAAAUU - 182
Stem-loop(if miRNA) --    G         G      C  A         A U   -   G  AC    AA       UUCU      G   U       U   UU
  UUUU AGCCAUUUU AACAUG AU UCAAAUAUU G CGA UUU AA  UUUU  AAUUUUC    UAAAAU GUC GUUUUCA AGG  A
  |||| ||||||||| |||||| || ||||||||| | ||| ||| ||  ||||  |||||||    |||||| ||| ||||||| |||
  AAAA UCGGUAAGG UUGUAU UA AGUUUAUAA C GCU GAA UU  AAAA  UUAAAAG    GUUUUA CAG UAAAAGU UCC  A
UU    A         G      A  C         - U   U   G  AA    AA       UACU      A   U       U   CC
Stem-loop sequence UUUUGAGCCAUUUUGAACAUGCAUAUCAAAUAUUAGUCGAUUUGAAACUUUUAAAAUUUUCUUCUUAAAAUGGUCUGUUUUCAUAGGUUAACCCCUUUGAAAAUUGACAAUUUUGUCAUGAAAAUUAAAAAAAAUUGAAGUUCGUCAAUAUUUGACAUAUAUGUUGGGAAUGGCUAAAAAUU