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BaseInfo

ncRNA ID novel_lus_miR707
Species Linum usitatissimum
Class miRNA
Genome position scaffold272:1584398-1584567 [+]
Reference genome Lusitatissimum_200_BGIv1.0
Source SRR2996369
Length 24
Mature sequence(if miRNA) 147 - AACAUGCAUGUUGGAAAUGGCUAA - 170
Stem-loop(if miRNA) --         AAU      G     A        A    A    A   -C     --     UCAA          U    G    UU
  AGUCAUUUU   UAUGCG GUUAA UAUUAGCC AUUU AAAA UUU  AAUUU  UUAUG    AAUUGGUUAA UUUC UAUG  A
  |||||||||   |||||| ||||| |||||||| |||| |||| |||  |||||  |||||    |||||||||| |||| ||||
  UCGGUAAAG   GUACGU CAAUU AUAAUCGG UAAA UUUU AAA  UUAAA  AAUAU    UUAACCAGUU AAAG GUAC  U
AA         GUU      A     -        C    C    A   CU     CG     ---C          U    -    CA
Stem-loop sequence AGUCAUUUUAAUUAUGCGGGUUAAAUAUUAGCCAAUUUAAAAAAUUUCAAUUUUUAUGUCAAAAUUGGUUAAUUUUCGUAUGUUAUACCAUGGAAAUUUGACCAAUUCUAUAAGCAAAUUUCAAAAUUUUCAAAUCGGCUAAUAUUAACAUGCAUGUUGGAAAUGGCUAA